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BaseInfo

ncRNA ID novel_osa_miR3618
Species Oryza sativa
Class miRNA
Genome position Chr10:19849384-19849586 [-]
Reference genome IRGSP-1.0
Source SRR2040393
Length 24
Mature sequence(if miRNA) 180 - AACACUUUCGUCAAUUCUCGAUCG - 203
Stem-loop(if miRNA) --                                    C               UC      U   A         C              --UGC    CA
  AACACUUUCGUCAAUUCUCGAUCGUUUUCUAUCCGC UUGAUCGUUAUUGAC  AGCCAC CAC CGAUAUGAC UUUUUACCCCUCAU     CAUG  U
  |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| ||| ||||||||| ||||||||||||||     ||||  U
  UUGUGAAGGCAGUUAAGAGCUAGCAAAAGAUAGGCG AACUAGCGAUAACUG  UUGGUG GUG GUUAUACUG AAAGAUGGGGAGUG     GUAC  A
AA                                    A               UA      U   C         C              UUCAU    AU
Stem-loop sequence AACACUUUCGUCAAUUCUCGAUCGUUUUCUAUCCGCCUUGAUCGUUAUUGACUCAGCCACUCACACGAUAUGACCUUUUUACCCCUCAUUGCCAUGCAUUAUACAUGUACUUGUGAGGGGUAGAAACGUCAUAUUGCGUGUGUGGUUAUGUCAAUAGCGAUCAAAGCGGAUAGAAAACGAUCGAGAAUUGACGGAAGUGUUAA