| ncRNA ID | novel_osa_miR3601 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr7:19007545-19007725 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR2040392 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAAUGUUGGGCACGGAUAUUCACG - 24 |
| Stem-loop(if miRNA) |
-UGCAC AC U -- ---- -- -------- GA GA UAUUC GUUUAACGUUUGACCGUUCGUCUUAUUUAAAAA UUUUU AAGAUU AGUAUUU UUAU UGCUAUUA U U ||||| ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||| |||||||| | AUAGG CGGGUUGUAAAUUGGCAGGCAGAAUAAAUUUUU AAAAA UUUUAA UUAUAAA AGUG AUGAUAAU A A GCACUU CA U CU AUUU UC UGUAUUUC AC AA |
| Stem-loop sequence | UGCACUAUUCACGUUUAACGUUUGACCGUUCGUCUUAUUUAAAAAUUUUUUAAGAUUAGUAUUUUUAUUGCUAUUAGAUGAUAAAACAUAAUAGUACUUUAUGUGUGACUAAAUAUUUUUAAAUUUUUCAAAAAUUUUUUAAAUAAGACGGACGGUUAAAUGUUGGGCACGGAUAUUCACG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015770137.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase At4g36180 (LOC9268112), mRNA | probable LRR receptor-like serine/threonine-protein kinase At4g36180(LOC9268112) | coding protein | psRNATarget | |||||||||
| AK120358.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013067F13, full insert sequence | NA | coding protein | psRNATarget |