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BaseInfo

ncRNA ID	novel_osa_miR3569
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:16017085-16017169 [+]
Reference genome	IRGSP-1.0
Source	SRR2040392
Length	22
Mature sequence(if miRNA)	1 - UUUAGACCCGGUUGGUAGCACC - 22
Stem-loop(if miRNA)	--     A            C               A    A   UUUAG CCCGGUUGGUAG ACCAACCGGGGCUAA GAUC C   ||||| |||||||||||| ||||||||||||||| |||| C   AAAUC GGGCCAACCAUU UGGUUGGCCCUGAUU CUAG G AG     A            A               A    G
Stem-loop sequence	UUUAGACCCGGUUGGUAGCACCAACCGGGGCUAAAGAUCACCGGGAUCAUUAGUCCCGGUUGGUAUUACCAACCGGGACUAAAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015755256.1	ncRNA:22   CCACGAUGGUUGGCCCAGAUUU   1   ||||=|||||||||||*||||| targets:68   GGUGUUACCAACCGGGACUAAA   89 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget
AK288405.1	ncRNA:22   CCACGAUGGUUGGCCCAGAUUU   1   ||||=|||||||||||*||||| targets:2405   GGUGUUACCAACCGGGACUAAA   2426 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:22   CCACGAUGGUUGGCCCAGAUUU   1   *|||=|||||||||||*||||| targets:923   UGUGUUACCAACCGGGACUAAA   944 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288424.1	ncRNA:22   CCACGAUGGUUGGCCCAGAUUU   1   *|||=|||||||||||*||||| targets:2398   AGUGUUACCAACCGGGACUAAA   2419 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288463.1	ncRNA:22   CCACGAUGGUUGGCCCAGAUUU   1   **||=|||||||||||*||||| targets:461   UAUGUUACCAACCGGGACUAAA   482 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK241906.1	ncRNA:22   CCACGAUGGUUGGCCCAGAUUU   1   ||*||*||||||||||*||||| targets:1774   GGAGCCACCAACCGGGACUAAA   1795 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence	NA	coding protein	psRNATarget
AK242216.1	ncRNA:22   CCACGAUGGUUGGCCCAGAUUU   1   |***||||||||||||*||||| targets:703   GAAUCUACCAACCGGGACUAAA   724 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget