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BaseInfo

ncRNA ID	novel_osa_miR3568
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:1630243-1630350 [-]
Reference genome	IRGSP-1.0
Source	SRR1555747;SRR1556020
Length	24
Mature sequence(if miRNA)	85 - AAGGGAUUUUAGAUGGAUGUGGCA - 108
Stem-loop(if miRNA)	--          A                                     UUUC   AAGGGAUUUU GAUGGAUGUGGCACUUCAUAGUACUACGAAUCUAGAC    A   |||||||||| |||||||||||||||||||||||||||||||||||||   UUCCCUAAAA CUACCUACACCGUGAAGUAUCAUGAUGCUUAGAUCUG    G UA          C                                     UCUG
Stem-loop sequence	AAGGGAUUUUAGAUGGAUGUGGCACUUCAUAGUACUACGAAUCUAGACUUUCAGGUCUGUCUAGAUUCGUAGUACUAUGAAGUGCCACAUCCAUCCAAAAUCCCUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015792363.1	ncRNA:24   ACGGUGUAGGUAGAUUUUAGGGAA   1   ||=|||||||*||||||||||||| targets:2087   UGUCACAUCCCUCUAAAAUCCCUU   2110 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group protein RFT1 homolog (LOC4343254), transcript variant X2, mRNA	protein RFT1 homolog(LOC4343254)	coding protein	psRNATarget
XM_015792362.1	ncRNA:24   ACGGUGUAGGUAGAUUUUAGGGAA   1   ||=|||||||*||||||||||||| targets:2204   UGUCACAUCCCUCUAAAAUCCCUU   2227 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group protein RFT1 homolog (LOC4343254), transcript variant X1, mRNA	protein RFT1 homolog(LOC4343254)	coding protein	psRNATarget
AK288180.1	ncRNA:24   ACGGUGUAGGUAGAUUUUAGGGAA   1   ||=|||||||*||||||||||||| targets:1338   UGUCACAUCCCUCUAAAAUCCCUU   1361 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090005C24, full insert sequence	NA	coding protein	psRNATarget
AK288305.1	ncRNA:24   ACGGUGUAGGUAGAUUUUAGGGAA   1   |*=|*|||||=|||||||||=||| targets:1048   UAUCUCAUCCGUCUAAAAUCUCUU   1071 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence	NA	coding protein	psRNATarget
AK288305.1	ncRNA:24   ACGGUGUAGGUAGAUUUUAGGGAA   1   |*=|*|||||=|||||||||=||| targets:1379   UAUCUCAUCCGUCUAAAAUCUCUU   1402 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence	NA	coding protein	psRNATarget