ncRNA ID | novel_osa_miR3566 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:13702246-13702344 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040391 |
Length | 24 |
Mature sequence(if miRNA) | 76 - GACACUUAUCUGUGACGGGCCAUA - 99 |
Stem-loop(if miRNA) |
--    C    C          CAUAA   A               A     GACA UUAU UGUGACGGGC     UUG GGCCCGAUUGAGAUG GGG   |||| |||| ||||||||||     ||| ||||||||||||||| ||U   CUGU AGUA ACACUGCCCG     AAU CCGGGUUAACUCUAU CCU UA    C    A          AAGAA   C               A   |
Stem-loop sequence | GACACUUAUCUGUGACGGGCCAUAAUUGAGGCCCGAUUGAGAUGAGGGUUCCAUAUCUCAAUUGGGCCCUAAAAGAAGCCCGUCACAAAUGACUGUCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288447.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence | NA | coding protein | psRNATarget |