ncRNA ID | novel_osa_miR3560 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:19438816-19438861 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040391;SRR2040392 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUAUUUGUAUUGUUUGACC - 20 |
Stem-loop(if miRNA) |
--  C           G  UUUU   UC AAUAAUAUAAG GA    G   || ||||||||||| ||   AG UUGUUAUGUUU UU    A CC  U           A  UUUA |
Stem-loop sequence | UCCAAUAAUAUAAGGGAUUUUGAAUUUUUAUUUGUAUUGUUUGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK109584.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-137-A10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288977.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090085K17, full insert sequence | NA | coding protein | psRNATarget |