ncRNA ID | novel_osa_miR3554 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:4047298-4047446 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555747;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 126 - AAGAUGGCUGGGAUUAAAAAUCAA - 149 |
Stem-loop(if miRNA) |
--    U         U                                 AUUCCCUCG  UA     CCAAUUC   AAGA GGCUGGGAU AAAAAUCAAAUUCCCAUUUUAAUCUCAUCAUCA         UG  AACUC       C   |||| ||||||||| |||||||||||||||||||||||||||||||||         ||  |||||   UUCU CUGACCCUA UUUUUAGUUUAAGGGUAGAAUUAGAGUGGUAGU         AC  UUGAG       C UG    -         C                                 GCCGAACAA  CA     CUCCCAU |
Stem-loop sequence | AAGAUGGCUGGGAUUAAAAAUCAAAUUCCCAUUUUAAUCUCAUCAUCAAUUCCCUCGUGUAAACUCCCAAUUCCCUACCCUCGAGUUACCAAACAAGCCGUGAUGGUGAGAUUAAGAUGGGAAUUUGAUUUUUCAUCCCAGUCUCUUGU |