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BaseInfo

ncRNA ID novel_osa_miR3554
Species Oryza sativa
Class miRNA
Genome position Chr1:4047298-4047446 [-]
Reference genome IRGSP-1.0
Source SRR1555747;SRR1556020
Length 24
Mature sequence(if miRNA) 126 - AAGAUGGCUGGGAUUAAAAAUCAA - 149
Stem-loop(if miRNA) --    U         U                                 AUUCCCUCG  UA     CCAAUUC
  AAGA GGCUGGGAU AAAAAUCAAAUUCCCAUUUUAAUCUCAUCAUCA         UG  AACUC       C
  |||| ||||||||| |||||||||||||||||||||||||||||||||         ||  |||||
  UUCU CUGACCCUA UUUUUAGUUUAAGGGUAGAAUUAGAGUGGUAGU         AC  UUGAG       C
UG    -         C                                 GCCGAACAA  CA     CUCCCAU
Stem-loop sequence AAGAUGGCUGGGAUUAAAAAUCAAAUUCCCAUUUUAAUCUCAUCAUCAAUUCCCUCGUGUAAACUCCCAAUUCCCUACCCUCGAGUUACCAAACAAGCCGUGAUGGUGAGAUUAAGAUGGGAAUUUGAUUUUUCAUCCCAGUCUCUUGU