ncRNA ID | novel_osa_miR3547 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:5578756-5578835 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040391;SRR1738210 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAAAUGGACCGCACGCGAAA - 21 |
Stem-loop(if miRNA) |
--                         C   C A     U   UCGUGUGCGGUCCAUUUAAGAGGAC GCA G GAAAA C   ||||||||||||||||||||||||| ||| | ||||| G   AGCGCACGCCAGGUAAAUUCUCCUG CGU C CUUUU A AA                         U   A -     U |
Stem-loop sequence | UCGUGUGCGGUCCAUUUAAGAGGACCGCACGAGAAAAUCGAUUUUUCCAUGCUGUCCUCUUAAAUGGACCGCACGCGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288261.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090015P07, full insert sequence | NA | coding protein | psRNATarget |