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BaseInfo

ncRNA ID novel_osa_miR3545
Species Oryza sativa
Class miRNA
Genome position Chr10:21454630-21454709 [+]
Reference genome IRGSP-1.0
Source SRR1555747;SRR1556020
Length 23
Mature sequence(if miRNA) 58 - CUAUAUUUUGGGACAGAGGGAGU - 80
Stem-loop(if miRNA) --      CA         U       C          GA
  UCCCUC  UCCUAGAAU UAGCUAC UUUAGCUUAU  A
  ||||||  ||||||||| ||||||| ||||||||||
  AGGGAG  AGGGUUUUA AUCGAUG AAAUCGAAUG  U
UG      AC         U       A          UU
Stem-loop sequence UCCCUCCAUCCUAGAAUUUAGCUACCUUUAGCUUAUGAAUUUGUAAGCUAAAAGUAGCUAUAUUUUGGGACAGAGGGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015779315.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||||||||||||||||||||
targets:4415   ACUCCCUCUGUCCCAAAAUAUAG   4437

0.0 PREDICTED: Oryza sativa Japonica Group protein Rf1, mitochondrial (LOC9271155), mRNA protein Rf1, mitochondrial(LOC9271155) coding protein psRNATarget
XM_015770193.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||||||||||||||||||||
targets:1818   ACUCCCUCUGUCCCAAAAUAUAG   1840

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329136 (LOC4329136), transcript variant X1, mRNA uncharacterized LOC4329136(LOC4329136) coding protein psRNATarget
XM_015770193.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||||||||||||||||*
targets:1033   ACUCCCUCUGUCCCAAAAUAUAA   1055

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329136 (LOC4329136), transcript variant X1, mRNA uncharacterized LOC4329136(LOC4329136) coding protein psRNATarget
CT833367.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||||||||||||=|||||||
targets:528   ACUCCCUCUGUCCCAGAAUAUAG   550

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA051O01, full insert sequence NA coding protein psRNATarget
HI404029.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=|||||||||||||||=|||
targets:5   ACUUCCUCUGUCCCAAAAUGUAG   27

1.5 Sequence 2154 from Patent EP2074227 NA coding protein psRNATarget
LQ236159.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=|||||||||||||||=|||
targets:5   ACUUCCUCUGUCCCAAAAUGUAG   27

1.5 Sequence 2154 from Patent EP2985353 NA coding protein psRNATarget
JB164490.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=|||||||||||||||=|||
targets:5   ACUUCCUCUGUCCCAAAAUGUAG   27

1.5 Sequence 2154 from Patent EP2559767 NA coding protein psRNATarget
XM_015788811.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=|||||||||||||||=|||
targets:824   ACUUCCUCUGUCCCAAAAUGUAG   846

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277009 (LOC107277009), transcript variant X1, mRNA uncharacterized LOC107277009(LOC107277009) coding protein psRNATarget
AK101936.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=||||||||||||||||||*
targets:1888   ACUUCCUCUGUCCCAAAAUAUAA   1910

1.0 Oryza sativa Japonica Group cDNA clone:J033074D16, full insert sequence NA coding protein psRNATarget
AK099713.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||||=||||||||||||||*
targets:1073   ACUCCCUUUGUCCCAAAAUAUAA   1095

2.0 Oryza sativa Japonica Group cDNA clone:J013084B13, full insert sequence NA coding protein psRNATarget
AK120662.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*||||||||||||||
targets:1563   ACUCCCUCCGUCCCAAAAUAUAG   1585

1.0 Oryza sativa Japonica Group cDNA clone:J013158K14, full insert sequence NA coding protein psRNATarget
AK288798.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=|||||||||||||||=||*
targets:1614   ACUUCCUCUGUCCCAAAAUGUAA   1636

2.5 Oryza sativa Japonica Group cDNA, clone: J090070H05, full insert sequence NA coding protein psRNATarget
AK063060.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||||||*|||||=|||||||
targets:533   ACUCCCUCUAUCCCAGAAUAUAG   555

2.5 Oryza sativa Japonica Group cDNA clone:001-110-F08, full insert sequence NA coding protein psRNATarget
AK318582.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=||||*||||||||||||||
targets:23   ACUUCCUCCGUCCCAAAAUAUAG   45

1.0 Oryza sativa Japonica Group cDNA, clone: J090094D17, full insert sequence NA coding protein psRNATarget
AK062793.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:180   ACUCCCUCCGUCCCAAAAUAUAA   202

2.0 Oryza sativa Japonica Group cDNA clone:001-107-C05, full insert sequence NA coding protein psRNATarget
XM_015763567.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:1370   ACUCCCUCCGUCCCAAAAUAUAA   1392

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276434 (LOC107276434), mRNA uncharacterized LOC107276434(LOC107276434) coding protein psRNATarget
AK287611.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:1442   ACUCCCUCCGUCCCAAAAUAUAA   1464

2.0 Oryza sativa Japonica Group cDNA, clone: J065059A09, full insert sequence NA coding protein psRNATarget
AK100759.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:626   ACUCCCUCCGUCCCAAAAUAUAA   648

2.0 Oryza sativa Japonica Group cDNA clone:J023119B10, full insert sequence NA coding protein psRNATarget
XM_015770646.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:1943   ACUCCCUCCGUCCCAAAAUAUAA   1965

2.0 PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 46, chloroplastic (LOC4328128), mRNA protein DETOXIFICATION 46, chloroplastic(LOC4328128) coding protein psRNATarget
XM_015763251.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:1580   ACUCCCUCCGUCCCAAAAUAUAA   1602

2.0 PREDICTED: Oryza sativa Japonica Group F-box only protein 7 (LOC4351522), transcript variant X2, mRNA F-box only protein 7(LOC4351522) coding protein psRNATarget
XM_015763075.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||||||||||||*||||||*
targets:2807   ACUCCCUCUGUCCCAUAAUAUAA   2829

2.5 PREDICTED: Oryza sativa Japonica Group protein trichome birefringence-like 28 (LOC4327430), transcript variant X3, mRNA protein trichome birefringence-like 28(LOC4327430) coding protein psRNATarget
AK066842.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:923   ACUCCCUCCGUCCCAAAAUAUAA   945

2.0 Oryza sativa Japonica Group cDNA clone:J013084A11, full insert sequence NA coding protein psRNATarget
AK288180.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:1267   ACUCCCUCCGUCCCAAAAUAUAA   1289

2.0 Oryza sativa Japonica Group cDNA, clone: J090005C24, full insert sequence NA coding protein psRNATarget
AK288546.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:1251   ACUCCCUCCGUCCCAAAAUAUAA   1273

2.0 Oryza sativa Japonica Group cDNA, clone: J090046I04, full insert sequence NA coding protein psRNATarget
AK242602.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:3742   ACUCCCUCCGUCCCAAAAUAUAA   3764

2.0 Oryza sativa Japonica Group cDNA, clone: J090014K11, full insert sequence NA coding protein psRNATarget
AK100110.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:2412   ACUCCCUCCGUCCCAAAAUAUAA   2434

2.0 Oryza sativa Japonica Group cDNA clone:J023005H19, full insert sequence NA coding protein psRNATarget
XM_015761638.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:3864   ACUCCCUCCGUCCCAAAAUAUAA   3886

2.0 PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107278048), mRNA putative receptor protein kinase ZmPK1(LOC107278048) coding protein psRNATarget
AK289013.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||||||||||||*||||||*
targets:1351   ACUCCCUCUGUCCCAUAAUAUAA   1373

2.5 Oryza sativa Japonica Group cDNA, clone: J090089J03, full insert sequence NA coding protein psRNATarget
AK288631.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||||||||*|||||||*
targets:1281   ACUCCCUCUGUCCCUAAAUAUAA   1303

2.5 Oryza sativa Japonica Group cDNA, clone: J090055C12, full insert sequence NA coding protein psRNATarget
XM_015784400.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:3520   ACUCCCUCCGUCCCAAAAUAUAA   3542

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X13, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784401.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:3568   ACUCCCUCCGUCCCAAAAUAUAA   3590

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X14, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784390.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:4093   ACUCCCUCCGUCCCAAAAUAUAA   4115

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X4, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784399.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:4991   ACUCCCUCCGUCCCAAAAUAUAA   5013

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X12, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784392.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5025   ACUCCCUCCGUCCCAAAAUAUAA   5047

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X6, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784395.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X9, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784404.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X17, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784389.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X3, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784397.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X11, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784391.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X5, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784388.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784393.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X7, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784402.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X15, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784396.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5511   ACUCCCUCCGUCCCAAAAUAUAA   5533

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X10, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784387.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X1, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784405.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||||*
targets:5516   ACUCCCUCCGUCCCAAAAUAUAA   5538

2.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X18, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
LQ235816.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  =||*|||||||||||||||=|||
targets:5   GCUACCUCUGUCCCAAAAUGUAG   27

1.5 Sequence 1811 from Patent EP2985353 NA coding protein psRNATarget
HI403686.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  =||*|||||||||||||||=|||
targets:5   GCUACCUCUGUCCCAAAAUGUAG   27

1.5 Sequence 1811 from Patent EP2074227 NA coding protein psRNATarget
JB164147.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  =||*|||||||||||||||=|||
targets:5   GCUACCUCUGUCCCAAAAUGUAG   27

1.5 Sequence 1811 from Patent EP2559767 NA coding protein psRNATarget
AK066878.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=||||*||||||=|||||||
targets:2013   ACUUCCUCCGUCCCAGAAUAUAG   2035

2.5 Oryza sativa Japonica Group cDNA clone:J013088G14, full insert sequence NA coding protein psRNATarget
AK066878.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=||||*||||||=|||||||
targets:2090   ACUUCCUCCGUCCCAGAAUAUAG   2112

2.5 Oryza sativa Japonica Group cDNA clone:J013088G14, full insert sequence NA coding protein psRNATarget
LQ235759.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||=||*|||||||||||||*
targets:5   ACUCCUUCCGUCCCAAAAUAUAA   27

3.0 Sequence 1754 from Patent EP2985353 NA coding protein psRNATarget
HI403629.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||=||*|||||||||||||*
targets:5   ACUCCUUCCGUCCCAAAAUAUAA   27

3.0 Sequence 1754 from Patent EP2074227 NA coding protein psRNATarget
JB164090.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||=||*|||||||||||||*
targets:5   ACUCCUUCCGUCCCAAAAUAUAA   27

3.0 Sequence 1754 from Patent EP2559767 NA coding protein psRNATarget
CT836481.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=||||||||||||||||*|*
targets:299   ACUUCCUCUGUCCCAAAAUAAAU   321

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA021E02, full insert sequence NA coding protein psRNATarget
XM_015787285.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||||||=|||||||||*
targets:1422   ACUACCUCUGUCUCAAAAUAUAA   1444

2.5 PREDICTED: Oryza sativa Japonica Group very-long-chain 3-oxoacyl-CoA reductase 1-like (LOC107276302), mRNA very-long-chain 3-oxoacyl-CoA reductase 1-like(LOC107276302) coding protein psRNATarget
AK099435.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||=|||*|||||||||||||*
targets:1678   ACUCUCUCCGUCCCAAAAUAUAA   1700

3.0 Oryza sativa Japonica Group cDNA clone:J013014O02, full insert sequence NA coding protein psRNATarget
AK109615.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||=||*|||||||||||||*
targets:1461   ACUCCUUCCGUCCCAAAAUAUAA   1483

3.0 Oryza sativa Japonica Group cDNA clone:002-137-G12, full insert sequence NA coding protein psRNATarget
XM_015760168.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||=||*|||||||||||||*
targets:1461   ACUCCUUCCGUCCCAAAAUAUAA   1483

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350559 (LOC4350559), mRNA uncharacterized LOC4350559(LOC4350559) coding protein psRNATarget
CT832892.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=|||||*||||||||||||*
targets:2360   ACUUCCUCUAUCCCAAAAUAUAA   2382

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA245M22, full insert sequence NA coding protein psRNATarget
CT832890.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||=|||||*||||||||||||*
targets:2395   ACUUCCUCUAUCCCAAAAUAUAA   2417

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA230O14, full insert sequence NA coding protein psRNATarget
XM_015790547.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||=|||*|||||||||||||*
targets:2398   ACUCUCUCCGUCCCAAAAUAUAA   2420

3.0 PREDICTED: Oryza sativa Japonica Group primary amine oxidase (LOC4343673), mRNA primary amine oxidase(LOC4343673) coding protein psRNATarget
AK103056.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*|||=||||||||||||||*
targets:3049   ACUACCUUUGUCCCAAAAUAUAA   3071

2.0 Oryza sativa Japonica Group cDNA clone:J033117K01, full insert sequence NA coding protein psRNATarget
AK101891.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||=|||*|||||||||||||*
targets:3610   ACUCUCUCCGUCCCAAAAUAUAA   3632

3.0 Oryza sativa Japonica Group cDNA clone:J033070O08, full insert sequence NA coding protein psRNATarget
JB164878.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*||||||||||||||
targets:5   ACUACCUCCGUCCCAAAAUAUAG   27

1.0 Sequence 2542 from Patent EP2559767 NA coding protein psRNATarget
HI404417.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*||||||||||||||
targets:5   ACUACCUCCGUCCCAAAAUAUAG   27

1.0 Sequence 2542 from Patent EP2074227 NA coding protein psRNATarget
LQ236547.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*||||||||||||||
targets:5   ACUACCUCCGUCCCAAAAUAUAG   27

1.0 Sequence 2542 from Patent EP2985353 NA coding protein psRNATarget
XM_015755391.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||*||*||||||||||||||
targets:935   ACUCCAUCCGUCCCAAAAUAUAG   957

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347400 (LOC4347400), mRNA uncharacterized LOC4347400(LOC4347400) coding protein psRNATarget
AK100009.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*||||||*|||||||
targets:857   ACUCCCUCCGUCCCAUAAUAUAG   879

2.5 Oryza sativa Japonica Group cDNA clone:J013138B09, full insert sequence NA coding protein psRNATarget
AK100614.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |=*|=||||||||=|||||||||
targets:1556   AUACUCUCUGUCCUAAAAUAUAG   1578

2.5 Oryza sativa Japonica Group cDNA clone:J023108A15, full insert sequence NA coding protein psRNATarget
AK063301.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*|||||||||||*||
targets:527   ACUCCCUCCGUCCCAAAAUACAG   549

2.5 Oryza sativa Japonica Group cDNA clone:001-113-F03, full insert sequence NA coding protein psRNATarget
AK119279.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*||||||||*|||||
targets:1578   ACUCCCUCAGUCCCAAAUUAUAG   1600

2.5 Oryza sativa Japonica Group cDNA clone:001-130-B12, full insert sequence NA coding protein psRNATarget
AK288472.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||||||||*|||||*|||||||
targets:372   ACUCCCUCUAUCCCAUAAUAUAG   394

2.5 Oryza sativa Japonica Group cDNA, clone: J090037K20, full insert sequence NA coding protein psRNATarget
AK288303.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*||||||||||||||
targets:2076   ACUACCUCCGUCCCAAAAUAUAG   2098

1.0 Oryza sativa Japonica Group cDNA, clone: J090020E14, full insert sequence NA coding protein psRNATarget
AK064773.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||*||||||*|||||||
targets:2877   ACUCCCUCCGUCCCAUAAUAUAG   2899

2.5 Oryza sativa Japonica Group cDNA clone:J013000A22, full insert sequence NA coding protein psRNATarget
AK289044.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  =||=||||*||=|||||||||||
targets:5286   GCUUCCUCCGUUCCAAAAUAUAG   5308

2.5 Oryza sativa Japonica Group cDNA, clone: J090092F18, full insert sequence NA coding protein psRNATarget
AK288463.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  *|||||||*|||||||||||||*
targets:2817   UCUCCCUCCGUCCCAAAAUAUAA   2839

2.0 Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence NA coding protein psRNATarget
AK288011.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |=|=||||*|||||||||||||*
targets:745   AUUUCCUCCGUCCCAAAAUAUAA   767

2.0 Oryza sativa Japonica Group cDNA, clone: J075116J02, full insert sequence NA coding protein psRNATarget
XM_015766569.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |=|=||||*|||||||||||||*
targets:780   AUUUCCUCCGUCCCAAAAUAUAA   802

2.0 PREDICTED: Oryza sativa Japonica Group forkhead box protein G1 (LOC4324335), mRNA forkhead box protein G1(LOC4324335) coding protein psRNATarget
JB164096.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*||=|||||||||||
targets:5   ACUACCUCCGUUCCAAAAUAUAG   27

2.5 Sequence 1760 from Patent EP2559767 NA coding protein psRNATarget
LQ235765.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*||=|||||||||||
targets:5   ACUACCUCCGUUCCAAAAUAUAG   27

2.5 Sequence 1760 from Patent EP2985353 NA coding protein psRNATarget
HI403635.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*||=|||||||||||
targets:5   ACUACCUCCGUUCCAAAAUAUAG   27

2.5 Sequence 1760 from Patent EP2074227 NA coding protein psRNATarget
AK099164.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*=||||||*|||||||||||
targets:1568   ACUAUCUCUGUACCAAAAUAUAG   1590

2.5 Oryza sativa Japonica Group cDNA clone:J023073O03, full insert sequence NA coding protein psRNATarget
AK106090.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*=||||||*|||||||||||
targets:1565   ACUAUCUCUGUACCAAAAUAUAG   1587

2.5 Oryza sativa Japonica Group cDNA clone:001-207-B07, full insert sequence NA coding protein psRNATarget
AK061448.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*=||||||*|||||||||||
targets:1566   ACUAUCUCUGUACCAAAAUAUAG   1588

2.5 Oryza sativa Japonica Group cDNA clone:006-307-E03, full insert sequence NA coding protein psRNATarget
XM_015762809.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*=||||||*|||||||||||
targets:1567   ACUAUCUCUGUACCAAAAUAUAG   1589

2.5 PREDICTED: Oryza sativa Japonica Group amino acid permease 3 (LOC4351675), mRNA amino acid permease 3(LOC4351675) coding protein psRNATarget
JB164371.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*|||||||||||||*
targets:6   ACUACCUCCGUCCCAAAAUAUAA   28

2.0 Sequence 2035 from Patent EP2559767 NA coding protein psRNATarget
LQ236040.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*|||||||||||||*
targets:6   ACUACCUCCGUCCCAAAAUAUAA   28

2.0 Sequence 2035 from Patent EP2985353 NA coding protein psRNATarget
HI403910.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  |||*||||*|||||||||||||*
targets:6   ACUACCUCCGUCCCAAAAUAUAA   28

2.0 Sequence 2035 from Patent EP2074227 NA coding protein psRNATarget
CT830273.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||**||||||||||||*
targets:626   ACUCCCUCGAUCCCAAAAUAUAA   648

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN076N12, full insert sequence NA coding protein psRNATarget
AK068537.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||**||||||||||||*
targets:686   ACUCCCUCCAUCCCAAAAUAUAA   708

3.0 Oryza sativa Japonica Group cDNA clone:J013152L24, full insert sequence NA coding protein psRNATarget
EF576581.1
ncRNA:23   UGAGGGAGACAGGGUUUUAUAUC   1
  ||||||||**||||||||||||*
targets:699   ACUCCCUCGAUCCCAAAAUAUAA   721

3.0 Oryza sativa (indica cultivar-group) clone OSS-481-539-C4 chlorophyll a-b binding protein mRNA, partial cds NA coding protein psRNATarget
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