ncRNA ID | novel_osa_miR3543 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:21069756-21069873 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040391 |
Length | 23 |
Mature sequence(if miRNA) | 96 - GUUAUUAACACUUUAUCGGAUGA - 118 |
Stem-loop(if miRNA) |
--      C      A  C               -AA     U   CCUCAUC     U   AUCCGA AAAGUG UA UAACAUUGUUCACAA   UCACA AUC       UGGUU U   |||||| |||||| || |||||||||||||||   ||||| |||       ||||| A   UAGGCU UUUCAC AU AUUGUAACAAGUGUU   AGUGU UAG       AUCAA U AG      A      A  U               CUA     U   ACACAAU     A |
Stem-loop sequence | AUCCGACAAAGUGAUACUAACAUUGUUCACAAAAUCACAUAUCCCUCAUCUGGUUUUAUAAACUAUAACACAGAUUUGUGAAUCUUGUGAACAAUGUUAUUAACACUUUAUCGGAUGA |