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BaseInfo

ncRNA ID novel_osa_miR3543
Species Oryza sativa
Class miRNA
Genome position Chr4:21069756-21069873 [+]
Reference genome IRGSP-1.0
Source SRR2040391
Length 23
Mature sequence(if miRNA) 96 - GUUAUUAACACUUUAUCGGAUGA - 118
Stem-loop(if miRNA) --      C      A  C               -AA     U   CCUCAUC     U
  AUCCGA AAAGUG UA UAACAUUGUUCACAA   UCACA AUC       UGGUU U
  |||||| |||||| || |||||||||||||||   ||||| |||       ||||| A
  UAGGCU UUUCAC AU AUUGUAACAAGUGUU   AGUGU UAG       AUCAA U
AG      A      A  U               CUA     U   ACACAAU     A
Stem-loop sequence AUCCGACAAAGUGAUACUAACAUUGUUCACAAAAUCACAUAUCCCUCAUCUGGUUUUAUAAACUAUAACACAGAUUUGUGAAUCUUGUGAACAAUGUUAUUAACACUUUAUCGGAUGA