| ncRNA ID | novel_osa_miR3540 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:17134223-17134330 [+] |
| Reference genome | IRGSP-1.0 |
| Source | SRR2040391 |
| Length | 21 |
| Mature sequence(if miRNA) | 88 - UCACAGAUGACUAGUUACCUG - 108 |
| Stem-loop(if miRNA) |
-- C -AAAAU C AU AG U GGUGACUAGUCA CUGUGAUGGGUUG GAAACC GUC AGGUG G U |||||||||||| ||||||||||||| |||||| ||| ||||| | CCAUUGAUCAGU GACACUGCCCGGC CUUUGG CAG UCCAC C U GU A CUUCAC - CU CA A |
| Stem-loop sequence | GGUGACUAGUCACCUGUGAUGGGUUGAAAAUGAAACCCGUCAUAGGUGAGGUUUACACCACCUUCGACGGUUUCCACUUCCGGCCCGUCACAGAUGACUAGUUACCUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK288547.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence | NA | coding protein | psRNATarget |