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BaseInfo

ncRNA ID novel_osa_miR3524
Species Oryza sativa
Class miRNA
Genome position Chr12:4137074-4137131 [-]
Reference genome IRGSP-1.0
Source SRR2040391
Length 24
Mature sequence(if miRNA) 35 - ACCGGGACUAAAGACAACUCAGCC - 58
Stem-loop(if miRNA) --              CAA       ACG
  ACCGGGACUAAAGA   CUCAGCC   U
  ||||||||||||||   |||||||
  UGGCCCUGAUUUCU   GAGUCGG   G
CU              ACC       CCG
Stem-loop sequence ACCGGGACUAAAGACAACUCAGCCACGUGGCCGGCUGAGCCAUCUUUAGUCCCGGUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288734.1
ncRNA:24   CCGACUCAAC-AGAAAUCAGGGCCA   1
  |||**|*|||-||||||||||||||
targets:38   GGCAUAUUUGAUCUUUAGUCCCGGU   62

3.0 Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence NA coding protein psRNATarget