ncRNA ID | novel_osa_miR3523 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:20760754-20760861 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040391 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCACAGAUGACUAGUUACCUG - 21 |
Stem-loop(if miRNA) |
--            C             -AAAAU      C   AU     AG U   GGUGACUAGUCA CUGUGAUGGGUUG      GAAACC GUC  AGGUG  G U   |||||||||||| |||||||||||||      |||||| |||  |||||  |   CCAUUGAUCAGU GACACUGCCCGGC      CUUUGG CAG  UCCAC  C U GU            A             CUUCAC      -   CU     CA A |
Stem-loop sequence | GGUGACUAGUCACCUGUGAUGGGUUGAAAAUGAAACCCGUCAUAGGUGAGGUUUACACCACCUUCGACGGUUUCCACUUCCGGCCCGUCACAGAUGACUAGUUACCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288547.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence | NA | coding protein | psRNATarget |