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BaseInfo

ncRNA ID	novel_osa_miR3491
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:8221160-8221222 [+]
Reference genome	IRGSP-1.0
Source	SRR2040390;SRR2040394;SRR2040406;SRR4407953
Length	21
Mature sequence(if miRNA)	1 - GCCGCCGCUGUCGGAUCCGCC - 21
Stem-loop(if miRNA)	--   G     GU        C U     CG   GCC CCGCU  CGGAUCCG C GCGGU  C   ||| |||||  |||||||| | |||||  C   CGG GGCGA  GCCUAGGC G CGCCA  G CU   A     UG        A U     CC
Stem-loop sequence	GCCGCCGCUGUCGGAUCCGCCUGCGGUCGCCGCCACCGCUGACGGAUCCGGUAGCGGAGGCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK243563.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   ||||||*|||||=|||||||| targets:2171   GGCGGACCCGACGGCGGCGGC   2191 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100080K24, full insert sequence	NA	coding protein	psRNATarget
XM_015760019.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   ||||||*|||||=|||||||| targets:2452   GGCGGACCCGACGGCGGCGGC   2472 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 (LOC9268663), mRNA	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1(LOC9268663)	coding protein	psRNATarget
XM_015772399.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   |||||*||||||=|||||||| targets:846   GGCGGUUCCGACGGCGGCGGC   866 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331573 (LOC4331573), mRNA	uncharacterized LOC4331573(LOC4331573)	coding protein	psRNATarget
AK070000.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   |||||*||||||=|||||||| targets:774   GGCGGUUCCGACGGCGGCGGC   794 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023039B07, full insert sequence	NA	coding protein	psRNATarget
XM_015792913.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   |||||||*||=|||||||||| targets:215   GGCGGAUGCGGCAGCGGCGGC   235 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4344571 (LOC4344571), mRNA	uncharacterized LOC4344571(LOC4344571)	coding protein	psRNATarget
CT832590.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   |||||*||||||=|||||||| targets:651   GGCGGUUCCGACGGCGGCGGC   671 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA004E10, full insert sequence	NA	coding protein	psRNATarget
AK058365.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   |||||||*||=|||||||||| targets:216   GGCGGAUGCGGCAGCGGCGGC   236 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-014-F11, full insert sequence	NA	coding protein	psRNATarget
AK068373.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   |||||||*||=|||||||||| targets:202   GGCGGAUGCGGCAGCGGCGGC   222 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013149L10, full insert sequence	NA	coding protein	psRNATarget
AK109245.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   ||=|||||||||||||*|||| targets:289   GGUGGAUCCGACAGCGACGGC   309 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-156-G06, full insert sequence	NA	coding protein	psRNATarget
AK072464.1	ncRNA:21   CCGCCUAGGCUGUCGCCGCCG   1   **||||||||=|||||||||| targets:372   CACGGAUCCGGCAGCGGCGGC   392 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023120F04, full insert sequence	NA	coding protein	psRNATarget