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BaseInfo

ncRNA ID	novel_osa_miR3490
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:14882481-14882530 [-]
Reference genome	IRGSP-1.0
Source	SRR1555747;SRR1556020
Length	24
Mature sequence(if miRNA)	1 - UGUUAGUUGAGGGACCUCCGGUAU - 24
Stem-loop(if miRNA)	--   A    -A      ---     C   AUC GAGG  CCUCAA   GCGAA G   ||| ||||  ||||||   |||||   UGG CUCC  GGAGUU   UGUUU G UA   C    AG      GAU     U
Stem-loop sequence	AUCAGAGGACCUCAAGCGAACGGUUUUGUUAGUUGAGGGACCUCCGGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015763478.1	ncRNA:24   UAUGGCCUCCAGGGAGUUGA-UUGU   1   **||||||||||||||||||-|||| targets:1345   UCACCGGAGGUCCCUCAACUUAACA   1369 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351489 (LOC4351489), mRNA	uncharacterized LOC4351489(LOC4351489)	coding protein	psRNATarget
AK111428.1	ncRNA:24   UAUGGCCUCCAGGGAGUUGA-UUGU   1   **||||||||||||||||||-|||| targets:1340   UCACCGGAGGUCCCUCAACUUAACA   1364 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:002-182-H05, full insert sequence	NA	coding protein	psRNATarget
XM_015783142.1	ncRNA:24   UAUGGCCUCCAGGGAGUUGAUUGU   1   |||||||=**|||||||||||||| targets:183   AUACCGGGCAUCCCUCAACUAACA   206 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4338975 (LOC4338975), mRNA	uncharacterized LOC4338975(LOC4338975)	coding protein	psRNATarget