ncRNA ID | novel_osa_miR3489 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:7275477-7275556 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040390 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUCUAGUUUAACUAAAUGAAC - 21 |
Stem-loop(if miRNA) |
--      U       A   A   AU    UG       G   CUCUAG UUAACUA AUG ACU  AUUU  CUUUUGA A   |||||| ||||||| ||| |||  ||||  |||||||   GAGAUC AGUUGAU UAC UGA  UAAA  GAAAAUU U GU      C       C   C   AU    GU       U |
Stem-loop sequence | CUCUAGUUUAACUAAAUGAACUAUAUUUUGCUUUUGAGAUUUUAAAAGUGAAAUUAAGUCCAUCUAGUUGACCUAGAGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK102434.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J033093J01, full insert sequence | NA | coding protein | psRNATarget |