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BaseInfo

ncRNA ID novel_osa_miR3473
Species Oryza sativa
Class miRNA
Genome position Chr1:7700671-7700819 [+]
Reference genome IRGSP-1.0
Source SRR1555747;SRR1556020
Length 23
Mature sequence(if miRNA) 127 - AUAUUAUGGGACGGAUGGAGUAC - 149
Stem-loop(if miRNA) --     C                  AG     A        C           C    A A          UA
  AUUCC UCCGUCUCAUAAUAUAAG  AUUUU GGUGGAUG GACAUAUUCUA UACA U AAUCUGGACA  U
  ||||| ||||||||||||||||||  ||||| |||||||| ||||||||||| |||| | ||||||||||  G
  UGAGG AGGCAGGGUAUUAUAUUU  UAAAA CUACCUAU CUGUAUAGGAU AUGU A UUAGAUCUGU  A
CA     U                  CU     C        A           C    C C          CU
Stem-loop sequence AUUCCCUCCGUCUCAUAAUAUAAGAGAUUUUAGGUGGAUGCGACAUAUUCUACUACAAUAAAUCUGGACAUAUGAUCUGUCUAGAUUCACUGUACUAGGAUAUGUCAUAUCCAUCCAAAAUUCUUUAUAUUAUGGGACGGAUGGAGUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK241555.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||||||||||||||||||
targets:107   GUACUCCAUCCGUCCCAUAAUAU   129

0.0 Oryza sativa Japonica Group cDNA, clone: J065178B07, full insert sequence NA coding protein psRNATarget
AK101861.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *|||||||||||||=||||||||
targets:3468   UUACUCCAUCCGUCUCAUAAUAU   3490

1.5 Oryza sativa Japonica Group cDNA clone:J033070B12, full insert sequence NA coding protein psRNATarget
XM_015770193.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||||||||
targets:2852   GUACUCCCUCCGUCCCAUAAUAU   2874

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329136 (LOC4329136), transcript variant X1, mRNA uncharacterized LOC4329136(LOC4329136) coding protein psRNATarget
AK120143.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||||||||
targets:2925   GUACUCCCUCCGUCCCAUAAUAU   2947

1.0 Oryza sativa Japonica Group cDNA clone:J013028F03, full insert sequence NA coding protein psRNATarget
AK064773.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||||||||
targets:2875   GUACUCCCUCCGUCCCAUAAUAU   2897

1.0 Oryza sativa Japonica Group cDNA clone:J013000A22, full insert sequence NA coding protein psRNATarget
XM_015767620.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |*|||||||||||||||||||||
targets:1807   GAACUCCAUCCGUCCCAUAAUAU   1829

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4324862 (LOC4324862), mRNA uncharacterized LOC4324862(LOC4324862) coding protein psRNATarget
XM_015793226.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||||||||
targets:1741   GUACUCCCUCCGUCCCAUAAUAU   1763

1.0 PREDICTED: Oryza sativa Japonica Group putative lysine-specific demethylase JMJD5 (LOC9269734), transcript variant X3, mRNA putative lysine-specific demethylase JMJD5(LOC9269734) coding protein psRNATarget
XM_015793224.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||||||||
targets:1727   GUACUCCCUCCGUCCCAUAAUAU   1749

1.0 PREDICTED: Oryza sativa Japonica Group putative lysine-specific demethylase JMJD5 (LOC9269734), transcript variant X1, mRNA putative lysine-specific demethylase JMJD5(LOC9269734) coding protein psRNATarget
AK100009.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||||||||
targets:855   GUACUCCCUCCGUCCCAUAAUAU   877

1.0 Oryza sativa Japonica Group cDNA clone:J013138B09, full insert sequence NA coding protein psRNATarget
XM_015793225.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||||||||
targets:1654   GUACUCCCUCCGUCCCAUAAUAU   1676

1.0 PREDICTED: Oryza sativa Japonica Group putative lysine-specific demethylase JMJD5 (LOC9269734), transcript variant X2, mRNA putative lysine-specific demethylase JMJD5(LOC9269734) coding protein psRNATarget
AK066050.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||||||||||||*|||||
targets:1601   GUACUCCAUCCGUCCCAAAAUAU   1623

1.5 Oryza sativa Japonica Group cDNA clone:J013050F13, full insert sequence NA coding protein psRNATarget
AK067370.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||||||||
targets:918   GUACUCCCUCCGUCCCAUAAUAU   940

1.0 Oryza sativa Japonica Group cDNA clone:J013105M23, full insert sequence NA coding protein psRNATarget
AK289013.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*||=||||||||||||
targets:1349   GUACUCCCUCUGUCCCAUAAUAU   1371

2.5 Oryza sativa Japonica Group cDNA, clone: J090089J03, full insert sequence NA coding protein psRNATarget
XM_015763075.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*||=||||||||||||
targets:2805   GUACUCCCUCUGUCCCAUAAUAU   2827

2.5 PREDICTED: Oryza sativa Japonica Group protein trichome birefringence-like 28 (LOC4327430), transcript variant X3, mRNA protein trichome birefringence-like 28(LOC4327430) coding protein psRNATarget
XM_015795843.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||*||||||||=||||||||
targets:2312   UUACUACAUCCGUCUCAUAAUAU   2334

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g56310 (LOC4347034), transcript variant X1, mRNA pentatricopeptide repeat-containing protein At5g56310(LOC4347034) coding protein psRNATarget
XM_015772731.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||||*||||=||||||||
targets:160   GUACUCCAUACGUCUCAUAAUAU   182

2.5 PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 6.1 (LOC4326444), mRNA protein NRT1/ PTR FAMILY 6.1(LOC4326444) coding protein psRNATarget
AK288920.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:3872   UUACUCCCUCCGUCCCAUAAUAU   3894

1.0 Oryza sativa Japonica Group cDNA, clone: J090081L22, full insert sequence NA coding protein psRNATarget
XM_015772460.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:3043   CUACUCCCUCCGUCCCAUAAUAU   3065

1.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g23020 (LOC4331715), transcript variant X3, mRNA pentatricopeptide repeat-containing protein At3g23020(LOC4331715) coding protein psRNATarget
XM_015784849.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:2569   AUACUCCCUCCGUCCCAUAAUAU   2591

1.0 PREDICTED: Oryza sativa Japonica Group serine/threonine-protein kinase tricorner (LOC4339288), transcript variant X2, mRNA serine/threonine-protein kinase tricorner(LOC4339288) coding protein psRNATarget
XM_015784846.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:2513   AUACUCCCUCCGUCCCAUAAUAU   2535

1.0 PREDICTED: Oryza sativa Japonica Group serine/threonine-protein kinase tricorner (LOC4339288), transcript variant X1, mRNA serine/threonine-protein kinase tricorner(LOC4339288) coding protein psRNATarget
XM_015788213.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:2478   CUACUCCCUCCGUCCCAUAAUAU   2500

1.0 PREDICTED: Oryza sativa Japonica Group probable DNA helicase MCM9 (LOC4340503), transcript variant X1, mRNA probable DNA helicase MCM9(LOC4340503) coding protein psRNATarget
AK100667.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:2477   CUACUCCCUCCGUCCCAUAAUAU   2499

1.0 Oryza sativa Japonica Group cDNA clone:J023112H01, full insert sequence NA coding protein psRNATarget
AK063394.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:2439   AUACUCCCUCCGUCCCAUAAUAU   2461

1.0 Oryza sativa Japonica Group cDNA clone:001-114-H06, full insert sequence NA coding protein psRNATarget
XM_015788216.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:2336   CUACUCCCUCCGUCCCAUAAUAU   2358

1.0 PREDICTED: Oryza sativa Japonica Group probable DNA helicase MCM9 (LOC4340503), transcript variant X4, mRNA probable DNA helicase MCM9(LOC4340503) coding protein psRNATarget
XM_015794242.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  ||||||||||*|||||||||||*
targets:2340   GUACUCCAUCAGUCCCAUAAUAA   2362

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345662 (LOC4345662), transcript variant X2, mRNA uncharacterized LOC4345662(LOC4345662) coding protein psRNATarget
XM_015794241.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  ||||||||||*|||||||||||*
targets:2316   GUACUCCAUCAGUCCCAUAAUAA   2338

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345662 (LOC4345662), transcript variant X1, mRNA uncharacterized LOC4345662(LOC4345662) coding protein psRNATarget
XM_015794243.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  ||||||||||*|||||||||||*
targets:2224   GUACUCCAUCAGUCCCAUAAUAA   2246

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345662 (LOC4345662), transcript variant X3, mRNA uncharacterized LOC4345662(LOC4345662) coding protein psRNATarget
XM_015789462.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:544   AUACUCCCUCCGUCCCAUAAUAU   566

1.0 PREDICTED: Oryza sativa Japonica Group proline-, glutamic acid- and leucine-rich protein 1 (LOC4343789), mRNA proline-, glutamic acid- and leucine-rich protein 1(LOC4343789) coding protein psRNATarget
XM_015767968.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:1401   CUACUCCCUCCGUCCCAUAAUAU   1423

1.0 PREDICTED: Oryza sativa Japonica Group altered inheritance rate of mitochondria protein 25 (LOC4328840), mRNA altered inheritance rate of mitochondria protein 25(LOC4328840) coding protein psRNATarget
XM_015793712.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:1205   CUACUCCCUCCGUCCCAUAAUAU   1227

1.0 PREDICTED: Oryza sativa Japonica Group polyubiquitin-D (LOC4344831), mRNA polyubiquitin-D(LOC4344831) coding protein psRNATarget
XM_015756113.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:1618   CUACUCCCUCCGUCCCAUAAUAU   1640

1.0 PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At5g47070 (LOC4347684), mRNA probable receptor-like protein kinase At5g47070(LOC4347684) coding protein psRNATarget
AK106768.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:115   CUACUCCCUCCGUCCCAUAAUAU   137

1.0 Oryza sativa Japonica Group cDNA clone:002-115-F05, full insert sequence NA coding protein psRNATarget
AK108488.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||||||||
targets:82   AUACUCCCUCCGUCCCAUAAUAU   104

1.0 Oryza sativa Japonica Group cDNA clone:002-143-F11, full insert sequence NA coding protein psRNATarget
XM_015755391.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||||||||||||*|||||
targets:933   UUACUCCAUCCGUCCCAAAAUAU   955

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347400 (LOC4347400), mRNA uncharacterized LOC4347400(LOC4347400) coding protein psRNATarget
LQ236665.1
ncRNA:22   AUGAGGUAGGCAGGGUAUUAUA   1
  ||||||*|||||||||||||||
targets:1   UACUCCCUCCGUCCCAUAAUAU   22

1.0 Sequence 2660 from Patent EP2985353 NA coding protein psRNATarget
HI404535.1
ncRNA:22   AUGAGGUAGGCAGGGUAUUAUA   1
  ||||||*|||||||||||||||
targets:1   UACUCCCUCCGUCCCAUAAUAU   22

1.0 Sequence 2660 from Patent EP2074227 NA coding protein psRNATarget
JB164996.1
ncRNA:22   AUGAGGUAGGCAGGGUAUUAUA   1
  ||||||*|||||||||||||||
targets:1   UACUCCCUCCGUCCCAUAAUAU   22

1.0 Sequence 2660 from Patent EP2559767 NA coding protein psRNATarget
XM_015766432.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||=|||||||||
targets:4489   CUACUCCCUCCGUUCCAUAAUAU   4511

2.5 PREDICTED: Oryza sativa Japonica Group DNA ligase 3 (LOC4324149), mRNA DNA ligase 3(LOC4324149) coding protein psRNATarget
AK288846.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||=|||||||||
targets:1203   AUACUCCCUCCGUUCCAUAAUAU   1225

2.5 Oryza sativa Japonica Group cDNA, clone: J090075E22, full insert sequence NA coding protein psRNATarget
AK065455.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||=|||||||
targets:3289   CUACUCCCUCCGUCCUAUAAUAU   3311

2.5 Oryza sativa Japonica Group cDNA clone:J013023H14, full insert sequence NA coding protein psRNATarget
AK288822.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||=|||||||||
targets:2326   CUACUCCCUCCGUUCCAUAAUAU   2348

2.5 Oryza sativa Japonica Group cDNA, clone: J090073F24, full insert sequence NA coding protein psRNATarget
AK111456.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||*||||||||=||||||||
targets:2215   UUACUACAUCCGUCUCAUAAUAU   2237

2.5 Oryza sativa Japonica Group cDNA clone:002-183-C05, full insert sequence NA coding protein psRNATarget
XM_015777558.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||=|||||||||
targets:2462   CUACUCCCUCCGUUCCAUAAUAU   2484

2.5 PREDICTED: Oryza sativa Japonica Group glycosyltransferase family protein 64 protein C5 (LOC4333742), mRNA glycosyltransferase family protein 64 protein C5(LOC4333742) coding protein psRNATarget
XM_015773291.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||=|||||||
targets:2109   CUACUCCCUCCGUCCUAUAAUAU   2131

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9272202 (LOC9272202), mRNA uncharacterized LOC9272202(LOC9272202) coding protein psRNATarget
AK289040.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *|||||=||||||||||*|||||
targets:2195   CUACUCUAUCCGUCCCAAAAUAU   2217

2.5 Oryza sativa Japonica Group cDNA, clone: J090091O20, full insert sequence NA coding protein psRNATarget
AK242713.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||=|*|||||||||||||||
targets:1454   UUACUUCCUCCGUCCCAUAAUAU   1476

2.0 Oryza sativa Japonica Group cDNA, clone: J090041O10, full insert sequence NA coding protein psRNATarget
AK069433.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||=|||||||||
targets:265   UUACUCCCUCCGUUCCAUAAUAU   287

2.5 Oryza sativa Japonica Group cDNA clone:J023025M19, full insert sequence NA coding protein psRNATarget
XM_015773784.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||=|||||||
targets:1889   AUACUCCCUCCGUCCUAUAAUAU   1911

2.5 PREDICTED: Oryza sativa Japonica Group alanine aminotransferase 2 (LOC9266500), transcript variant X2, mRNA alanine aminotransferase 2(LOC9266500) coding protein psRNATarget
XM_015773783.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||=|||||||
targets:1795   AUACUCCCUCCGUCCUAUAAUAU   1817

2.5 PREDICTED: Oryza sativa Japonica Group alanine aminotransferase 2 (LOC9266500), transcript variant X1, mRNA alanine aminotransferase 2(LOC9266500) coding protein psRNATarget
AK241315.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||=|||||||||
targets:560   UUACUCCCUCCGUUCCAUAAUAU   582

2.5 Oryza sativa Japonica Group cDNA, clone: J065142A02, full insert sequence NA coding protein psRNATarget
XM_015758393.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|=||||||||||||*
targets:1645   GUACUCCCUUCGUCCCAUAAUAG   1667

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4348660 (LOC4348660), mRNA uncharacterized LOC4348660(LOC4348660) coding protein psRNATarget
AK109674.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|=||||||||||||*
targets:1515   GUACUCCCUUCGUCCCAUAAUAG   1537

3.0 Oryza sativa Japonica Group cDNA clone:002-145-B06, full insert sequence NA coding protein psRNATarget
AK288854.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||=|||||||
targets:788   CUACUCCCUCCGUCCUAUAAUAU   810

2.5 Oryza sativa Japonica Group cDNA, clone: J090075O17, full insert sequence NA coding protein psRNATarget
XM_015795728.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *|||||=*|||||||||||||||
targets:1084   CUACUCUCUCCGUCCCAUAAUAU   1106

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347738 (LOC4347738), transcript variant X1, mRNA uncharacterized LOC4347738(LOC4347738) coding protein psRNATarget
CT835949.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||||=|||||||*|||||
targets:503   AUACUCCAUUCGUCCCAAAAUAU   525

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI017C02, full insert sequence NA coding protein psRNATarget
AK100110.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||*|||||
targets:2410   GUACUCCCUCCGUCCCAAAAUAU   2432

2.5 Oryza sativa Japonica Group cDNA clone:J023005H19, full insert sequence NA coding protein psRNATarget
LQ236231.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||=|||||||||||||*|||||
targets:3   CUAUUCCAUCCGUCCCAAAAUAU   25

1.5 Sequence 2226 from Patent EP2985353 NA coding protein psRNATarget
JB164562.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||=|||||||||||||*|||||
targets:3   CUAUUCCAUCCGUCCCAAAAUAU   25

1.5 Sequence 2226 from Patent EP2559767 NA coding protein psRNATarget
HI404101.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||=|||||||||||||*|||||
targets:3   CUAUUCCAUCCGUCCCAAAAUAU   25

1.5 Sequence 2226 from Patent EP2074227 NA coding protein psRNATarget
AK099706.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||*|||||||||||
targets:1094   GUACUCCCUCCAUCCCAUAAUAU   1116

2.5 Oryza sativa Japonica Group cDNA clone:J013075K04, full insert sequence NA coding protein psRNATarget
XM_015770106.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*||||||||*||||||
targets:1732   GUACUCCCUCCGUCCCCUAAUAU   1754

2.5 PREDICTED: Oryza sativa Japonica Group eukaryotic translation initiation factor 5B (LOC4330604), transcript variant X2, mRNA eukaryotic translation initiation factor 5B(LOC4330604) coding protein psRNATarget
AK109840.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*||||||||*||||||
targets:1706   GUACUCCCUCCGUCCCCUAAUAU   1728

2.5 Oryza sativa Japonica Group cDNA clone:002-148-D12, full insert sequence NA coding protein psRNATarget
XM_015770105.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*||||||||*||||||
targets:1696   GUACUCCCUCCGUCCCCUAAUAU   1718

2.5 PREDICTED: Oryza sativa Japonica Group eukaryotic translation initiation factor 5B (LOC4330604), transcript variant X1, mRNA eukaryotic translation initiation factor 5B(LOC4330604) coding protein psRNATarget
XM_015770107.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*||||||||*||||||
targets:1674   GUACUCCCUCCGUCCCCUAAUAU   1696

2.5 PREDICTED: Oryza sativa Japonica Group eukaryotic translation initiation factor 5B (LOC4330604), transcript variant X3, mRNA eukaryotic translation initiation factor 5B(LOC4330604) coding protein psRNATarget
CT837708.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||*|||||||||||
targets:488   GUACUCCCUCCAUCCCAUAAUAU   510

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA220M04, full insert sequence NA coding protein psRNATarget
XM_015764835.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||*|||||
targets:599   GUACUCCCUCCGUCCCACAAUAU   621

2.5 PREDICTED: Oryza sativa Japonica Group E3 ubiquitin-protein ligase EL5-like (LOC107277589), mRNA E3 ubiquitin-protein ligase EL5-like(LOC107277589) coding protein psRNATarget
JB164090.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||*|||||
targets:3   GUACUCCUUCCGUCCCAAAAUAU   25

2.5 Sequence 1754 from Patent EP2559767 NA coding protein psRNATarget
LQ235759.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||*|||||
targets:3   GUACUCCUUCCGUCCCAAAAUAU   25

2.5 Sequence 1754 from Patent EP2985353 NA coding protein psRNATarget
HI403629.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||||||*|||||||||*|||||
targets:3   GUACUCCUUCCGUCCCAAAAUAU   25

2.5 Sequence 1754 from Patent EP2074227 NA coding protein psRNATarget
XM_015768707.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||||||||||||*||||*
targets:1189   UUACUCCAUCCGUCCCAAAAUAA   1211

2.5 PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X3, mRNA cysteine-rich repeat secretory protein 15-like(LOC107279942) coding protein psRNATarget
XM_015768705.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||||||||||||*||||*
targets:1189   UUACUCCAUCCGUCCCAAAAUAA   1211

2.5 PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X1, mRNA cysteine-rich repeat secretory protein 15-like(LOC107279942) coding protein psRNATarget
XM_015768708.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||||||||||||*||||*
targets:1189   UUACUCCAUCCGUCCCAAAAUAA   1211

2.5 PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X4, mRNA cysteine-rich repeat secretory protein 15-like(LOC107279942) coding protein psRNATarget
XM_015768706.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||||||||||||*||||*
targets:1189   UUACUCCAUCCGUCCCAAAAUAA   1211

2.5 PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X2, mRNA cysteine-rich repeat secretory protein 15-like(LOC107279942) coding protein psRNATarget
XM_015774394.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  **|||||*|||||||||||||||
targets:1890   CAACUCCCUCCGUCCCAUAAUAU   1912

1.0 PREDICTED: Oryza sativa Japonica Group U-box domain-containing protein 4-like (LOC107278225), mRNA U-box domain-containing protein 4-like(LOC107278225) coding protein psRNATarget
CT829461.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*||||||||||||||*
targets:1664   CUACUCCCUCCGUCCCAUAAUAC   1686

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122N08, full insert sequence NA coding protein psRNATarget
LQ236103.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||=|*|=|||||||||||||
targets:6   CUACUUCCUUCGUCCCAUAAUAU   28

3.0 Sequence 2098 from Patent EP2985353 NA coding protein psRNATarget
JB164434.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||=|*|=|||||||||||||
targets:6   CUACUUCCUUCGUCCCAUAAUAU   28

3.0 Sequence 2098 from Patent EP2559767 NA coding protein psRNATarget
HI403973.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||=|*|=|||||||||||||
targets:6   CUACUUCCUUCGUCCCAUAAUAU   28

3.0 Sequence 2098 from Patent EP2074227 NA coding protein psRNATarget
HI404102.1
ncRNA:22   AUGAGGUAGGCAGGGUAUUAUA   1
  |=||||*|||||||=|||||||
targets:1   UGCUCCCUCCGUCCUAUAAUAU   22

2.5 Sequence 2227 from Patent EP2074227 NA coding protein psRNATarget
LQ236232.1
ncRNA:22   AUGAGGUAGGCAGGGUAUUAUA   1
  |=||||*|||||||=|||||||
targets:1   UGCUCCCUCCGUCCUAUAAUAU   22

2.5 Sequence 2227 from Patent EP2985353 NA coding protein psRNATarget
JB164563.1
ncRNA:22   AUGAGGUAGGCAGGGUAUUAUA   1
  |=||||*|||||||=|||||||
targets:1   UGCUCCCUCCGUCCUAUAAUAU   22

2.5 Sequence 2227 from Patent EP2559767 NA coding protein psRNATarget
XM_015789761.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||*|||*|||||||=|||||||
targets:1258   GUAAUCCCUCCGUCCUAUAAUAU   1280

2.5 PREDICTED: Oryza sativa Japonica Group AT-rich interactive domain-containing protein 1B (LOC4343202), transcript variant X1, mRNA AT-rich interactive domain-containing protein 1B(LOC4343202) coding protein psRNATarget
XM_015789762.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||*|||*|||||||=|||||||
targets:1258   GUAAUCCCUCCGUCCUAUAAUAU   1280

2.5 PREDICTED: Oryza sativa Japonica Group AT-rich interactive domain-containing protein 1B (LOC4343202), transcript variant X2, mRNA AT-rich interactive domain-containing protein 1B(LOC4343202) coding protein psRNATarget
AK289112.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  |||*|||*|||||||=|||||||
targets:1271   GUAAUCCCUCCGUCCUAUAAUAU   1293

2.5 Oryza sativa Japonica Group cDNA, clone: J090096P07, full insert sequence NA coding protein psRNATarget
CT837722.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||=|||||||||||||*||||*
targets:406   CUAUUCCAUCCGUCCCAAAAUAA   428

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN037L13, full insert sequence NA coding protein psRNATarget
CT837721.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||=|||||||||||||*||||*
targets:405   CUAUUCCAUCCGUCCCAAAAUAA   427

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN037K13, full insert sequence NA coding protein psRNATarget
XM_015784405.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X18, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784387.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X1, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784396.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5509   AUACUCCCUCCGUCCCAAAAUAU   5531

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X10, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784402.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X15, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784393.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X7, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784388.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784391.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X5, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784397.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X11, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784389.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X3, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784404.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X17, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784395.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5514   AUACUCCCUCCGUCCCAAAAUAU   5536

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X9, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784392.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:5023   AUACUCCCUCCGUCCCAAAAUAU   5045

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X6, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784399.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:4989   AUACUCCCUCCGUCCCAAAAUAU   5011

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X12, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784390.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:4091   AUACUCCCUCCGUCCCAAAAUAU   4113

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X4, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784401.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:3566   AUACUCCCUCCGUCCCAAAAUAU   3588

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X14, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
XM_015784400.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:3518   AUACUCCCUCCGUCCCAAAAUAU   3540

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g48810 (LOC4337713), transcript variant X13, mRNA pentatricopeptide repeat-containing protein At3g48810(LOC4337713) coding protein psRNATarget
AK120662.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:1561   AUACUCCCUCCGUCCCAAAAUAU   1583

2.5 Oryza sativa Japonica Group cDNA clone:J013158K14, full insert sequence NA coding protein psRNATarget
XM_015761638.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:3862   CUACUCCCUCCGUCCCAAAAUAU   3884

2.5 PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107278048), mRNA putative receptor protein kinase ZmPK1(LOC107278048) coding protein psRNATarget
AK242602.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:3740   CUACUCCCUCCGUCCCAAAAUAU   3762

2.5 Oryza sativa Japonica Group cDNA, clone: J090014K11, full insert sequence NA coding protein psRNATarget
AK288546.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:1249   AUACUCCCUCCGUCCCAAAAUAU   1271

2.5 Oryza sativa Japonica Group cDNA, clone: J090046I04, full insert sequence NA coding protein psRNATarget
AK065786.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||*|||||||||||*|||||
targets:2026   UUACUACAUCCGUCCCAGAAUAU   2048

2.5 Oryza sativa Japonica Group cDNA clone:J013039J24, full insert sequence NA coding protein psRNATarget
AK288180.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:1265   AUACUCCCUCCGUCCCAAAAUAU   1287

2.5 Oryza sativa Japonica Group cDNA, clone: J090005C24, full insert sequence NA coding protein psRNATarget
AK066988.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||*|||||||||||*|||||
targets:2084   UUACUACAUCCGUCCCAGAAUAU   2106

2.5 Oryza sativa Japonica Group cDNA clone:J013093O18, full insert sequence NA coding protein psRNATarget
AK066842.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:921   AUACUCCCUCCGUCCCAAAAUAU   943

2.5 Oryza sativa Japonica Group cDNA clone:J013084A11, full insert sequence NA coding protein psRNATarget
AK100378.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*||||||||*||||||
targets:1352   UUACUCCCUCCGUCCCCUAAUAU   1374

2.5 Oryza sativa Japonica Group cDNA clone:J023085B20, full insert sequence NA coding protein psRNATarget
XM_015772651.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *|||||*||||||||||*|||||
targets:2525   UUACUCAAUCCGUCCCAGAAUAU   2547

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333636 (LOC4333636), transcript variant X1, mRNA uncharacterized LOC4333636(LOC4333636) coding protein psRNATarget
XM_015763251.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:1578   CUACUCCCUCCGUCCCAAAAUAU   1600

2.5 PREDICTED: Oryza sativa Japonica Group F-box only protein 7 (LOC4351522), transcript variant X2, mRNA F-box only protein 7(LOC4351522) coding protein psRNATarget
XM_015772652.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *|||||*||||||||||*|||||
targets:2381   UUACUCAAUCCGUCCCAGAAUAU   2403

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333636 (LOC4333636), transcript variant X2, mRNA uncharacterized LOC4333636(LOC4333636) coding protein psRNATarget
AK065068.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*||||||||*||||||
targets:1077   UUACUCCCUCCGUCCCCUAAUAU   1099

2.5 Oryza sativa Japonica Group cDNA clone:J013001K02, full insert sequence NA coding protein psRNATarget
AK065951.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*||||||||*||||||
targets:1262   AUACUCCCUCCGUCCCCUAAUAU   1284

2.5 Oryza sativa Japonica Group cDNA clone:J013045C05, full insert sequence NA coding protein psRNATarget
XM_015780608.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:1695   AUACUCCCUCCGUCCCACAAUAU   1717

2.5 PREDICTED: Oryza sativa Japonica Group amino acid permease 3 (LOC4336246), mRNA amino acid permease 3(LOC4336246) coding protein psRNATarget
XM_015770646.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:1941   AUACUCCCUCCGUCCCAAAAUAU   1963

2.5 PREDICTED: Oryza sativa Japonica Group protein DETOXIFICATION 46, chloroplastic (LOC4328128), mRNA protein DETOXIFICATION 46, chloroplastic(LOC4328128) coding protein psRNATarget
AK101131.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||*|||||||||||
targets:48   AUACUCCCUCCAUCCCAUAAUAU   70

2.5 Oryza sativa Japonica Group cDNA clone:J033026D12, full insert sequence NA coding protein psRNATarget
XM_015760168.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:1459   UUACUCCUUCCGUCCCAAAAUAU   1481

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350559 (LOC4350559), mRNA uncharacterized LOC4350559(LOC4350559) coding protein psRNATarget
AK100759.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:624   AUACUCCCUCCGUCCCAAAAUAU   646

2.5 Oryza sativa Japonica Group cDNA clone:J023119B10, full insert sequence NA coding protein psRNATarget
AK109615.1
ncRNA:23   CAUGAGGUAGGCAGGGUAUUAUA   1
  *||||||*|||||||||*|||||
targets:1459   UUACUCCUUCCGUCCCAAAAUAU   1481

2.5 Oryza sativa Japonica Group cDNA clone:002-137-G12, full insert sequence NA coding protein psRNATarget
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