Search result

BaseInfo

ncRNA ID novel_osa_miR3470
Species Oryza sativa
Class miRNA
Genome position Chr12:21290408-21290513 [+]
Reference genome IRGSP-1.0
Source SRR2040390
Length 24
Mature sequence(if miRNA) 83 - AAUGUGGGCAAUGCUAGAAUGACU - 106
Stem-loop(if miRNA) --             U        C    U                 A    U
  UCAUUCUAGCAUU CCCACAUU AUAU GAUGUUAAUGAAUCUAG CAUA A
  ||||||||||||| |||||||| |||| ||||||||||||||||| ||||
  AGUAAGAUCGUAA GGGUGUAA UAUA CUACGAUUACUUAGAUC GUGU U
UC             C        A    U                 C    A
Stem-loop sequence UCAUUCUAGCAUUUCCCACAUUCAUAUUGAUGUUAAUGAAUCUAGACAUAUAUAUGUGCCUAGAUUCAUUAGCAUCUAUAUAAAUGUGGGCAAUGCUAGAAUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015791767.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||=||||||||||||||||
targets:1657   AGUCAUUUUAGCAUUGCCCACAUU   1680

1.0 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At1g02370, mitochondrial (LOC4325784), mRNA pentatricopeptide repeat-containing protein At1g02370, mitochondrial(LOC4325784) coding protein psRNATarget
AK064623.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||=||||||||||||||||
targets:1663   AGUCAUUUUAGCAUUGCCCACAUU   1686

1.0 Oryza sativa Japonica Group cDNA clone:002-113-E04, full insert sequence NA coding protein psRNATarget
AK100772.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:600   AGUCAUUCUAGCAUUUCCCACAUU   623

1.5 Oryza sativa Japonica Group cDNA clone:J023120A05, full insert sequence NA coding protein psRNATarget
XM_015788300.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:598   AGUCAUUCUAGCAUUUCCCACAUU   621

1.5 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X2, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
XM_015788302.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:607   AGUCAUUCUAGCAUUUCCCACAUU   630

1.5 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X3, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
XM_015788299.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:629   AGUCAUUCUAGCAUUUCCCACAUU   652

1.5 PREDICTED: Oryza sativa Japonica Group GPI-anchored protein LORELEI (LOC4340837), transcript variant X1, mRNA GPI-anchored protein LORELEI(LOC4340837) coding protein psRNATarget
XM_015783671.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:984   AGUCAUUCUAGCAUUUCCCACAUU   1007

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339170 (LOC4339170), mRNA uncharacterized LOC4339170(LOC4339170) coding protein psRNATarget
CT837490.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:837   AGUCAUUCUAGCAUUUCCCACAUU   860

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F07, full insert sequence NA coding protein psRNATarget
AK287994.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:1465   AGUCAUUCUAGCAUUUCCCACAUU   1488

1.5 Oryza sativa Japonica Group cDNA, clone: J075099E21, full insert sequence NA coding protein psRNATarget
XM_015782137.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:1514   AGUCAUUCUAGCAUUUCCCACAUU   1537

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339294 (LOC4339294), mRNA uncharacterized LOC4339294(LOC4339294) coding protein psRNATarget
AK106586.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:614   AGUCAUUCUAGCAUUUCCCACAUU   637

1.5 Oryza sativa Japonica Group cDNA clone:002-111-E12, full insert sequence NA coding protein psRNATarget
XM_015760082.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:1495   AGUCAUUCUAGCAUUUCCCACAUU   1518

1.5 PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC4350193), mRNA putative protease Do-like 14(LOC4350193) coding protein psRNATarget
AK099655.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:695   AGUCAUUCUAGCAUUUCCCACAUU   718

1.5 Oryza sativa Japonica Group cDNA clone:J013066C07, full insert sequence NA coding protein psRNATarget
XM_015779938.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:888   AGUCAUUCUAGCAUUUCCCACAUU   911

1.5 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X2, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
XM_015779937.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:980   AGUCAUUCUAGCAUUUCCCACAUU   1003

1.5 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X1, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
XM_015760919.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:16   AGUCAUUCUAGCAUUUCCCACAUU   39

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350122 (LOC4350122), mRNA uncharacterized LOC4350122(LOC4350122) coding protein psRNATarget
AK102955.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:769   AGUCAUUCUAGCAUUUCCCACAUU   792

1.5 Oryza sativa Japonica Group cDNA clone:J033115G04, full insert sequence NA coding protein psRNATarget
XM_015781780.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:3145   AGUCAUUCUAGCAUUUCCCACAUU   3168

1.5 PREDICTED: Oryza sativa Japonica Group protein ASPARTIC PROTEASE IN GUARD CELL 2 (LOC4337402), mRNA protein ASPARTIC PROTEASE IN GUARD CELL 2(LOC4337402) coding protein psRNATarget
XM_015783728.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:2800   AGUCAUUCUAGCAUUUCCCACAUU   2823

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271594 (LOC9271594), transcript variant X1, mRNA uncharacterized LOC9271594(LOC9271594) coding protein psRNATarget
XM_015780917.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:4680   AGUCAUUCUAGCAUUUCCCACAUU   4703

1.5 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X2, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780918.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:4729   AGUCAUUCUAGCAUUUCCCACAUU   4752

1.5 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X3, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780916.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:4738   AGUCAUUCUAGCAUUUCCCACAUU   4761

1.5 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X1, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015764832.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:1187   AGUCAUUCUAGCAUUCCCCACAUU   1210

1.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC107276755), transcript variant X2, mRNA probable LRR receptor-like serine/threonine-protein kinase At3g47570(LOC107276755) coding protein psRNATarget
AK288229.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*||||||||
targets:3665   AGUCAUUCUAGCAUUUCCCACAUU   3688

1.5 Oryza sativa Japonica Group cDNA, clone: J090012M05, full insert sequence NA coding protein psRNATarget
XM_015755199.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||||*|||||||||||=|||||||
targets:1077   AGUCUUUCUAGCAUUGUCCACAUU   1100

1.5 PREDICTED: Oryza sativa Japonica Group cinnamoyl-CoA reductase 1 (LOC9270429), transcript variant X1, mRNA cinnamoyl-CoA reductase 1(LOC9270429) coding protein psRNATarget
XM_015755201.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||||*|||||||||||=|||||||
targets:1080   AGUCUUUCUAGCAUUGUCCACAUU   1103

1.5 PREDICTED: Oryza sativa Japonica Group cinnamoyl-CoA reductase 1 (LOC9270429), transcript variant X2, mRNA cinnamoyl-CoA reductase 1(LOC9270429) coding protein psRNATarget
XM_015768090.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||=|||||||*||||||||
targets:1230   AGUCAUUUUAGCAUUACCCACAUU   1253

2.5 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X2, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
CT837594.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||=|||||||*||||||||
targets:1286   AGUCAUUUUAGCAUUUCCCACAUU   1309

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN021M15, full insert sequence NA coding protein psRNATarget
XM_015768116.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||=|||||||*||||||||
targets:1339   AGUCAUUUUAGCAUUACCCACAUU   1362

2.5 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X5, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
XM_015768099.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||=|||||||*||||||||
targets:2526   AGUCAUUUUAGCAUUACCCACAUU   2549

2.5 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X3, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
XM_015768108.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||=|||||||*||||||||
targets:2683   AGUCAUUUUAGCAUUACCCACAUU   2706

2.5 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X4, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
AK288568.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||=|||||||*||||||||
targets:2781   AGUCAUUUUAGCAUUUCCCACAUU   2804

2.5 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
CT831709.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||||||||||*|||||||*
targets:1142   AGUCAUUCUAGCAUUUCCCACAUG   1165

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128P05, full insert sequence NA coding protein psRNATarget
CT835594.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:384   AGACUUUCUAGCAUUGCCCACAUU   407

0.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN021O24, full insert sequence NA coding protein psRNATarget
CT837839.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |*|||||||||||||*||||||||
targets:955   AAUCAUUCUAGCAUUUCCCACAUU   978

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105C15, full insert sequence NA coding protein psRNATarget
XM_015795868.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:1161   AGACUUUCUAGCAUUGCCCACAUU   1184

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277671 (LOC107277671), mRNA uncharacterized LOC107277671(LOC107277671) coding protein psRNATarget
XM_015765335.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:1196   AGACUUUCUAGCAUUGCCCACAUU   1219

0.0 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X2, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
CT837661.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:1196   AGACUUUCUAGCAUUGCCCACAUU   1219

0.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063K17, full insert sequence NA coding protein psRNATarget
CT836294.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||||||*|||||||*||||||||
targets:1217   AGUCAUUAUAGCAUUUCCCACAUU   1240

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN014A10, full insert sequence NA coding protein psRNATarget
AK066283.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:948   AGACUUUCUAGCAUUGCCCACAUU   971

0.0 Oryza sativa Japonica Group cDNA clone:J013063D15, full insert sequence NA coding protein psRNATarget
XM_015790275.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||||||||||*||||*||||||||
targets:1714   AGUCAUUCUAACAUUUCCCACAUU   1737

2.5 PREDICTED: Oryza sativa Japonica Group alpha-humulene synthase (LOC9270657), transcript variant X2, mRNA alpha-humulene synthase(LOC9270657) coding protein psRNATarget
XM_015790274.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||||||||||*||||*||||||||
targets:1963   AGUCAUUCUAACAUUUCCCACAUU   1986

2.5 PREDICTED: Oryza sativa Japonica Group alpha-humulene synthase (LOC9270657), transcript variant X1, mRNA alpha-humulene synthase(LOC9270657) coding protein psRNATarget
XM_015765333.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:2095   AGACUUUCUAGCAUUGCCCACAUU   2118

0.0 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X1, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
XM_015765337.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:2710   AGACUUUCUAGCAUUGCCCACAUU   2733

0.0 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X5, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
AK119344.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:1164   AGACUUUCUAGCAUUGCCCACAUU   1187

0.0 Oryza sativa Japonica Group cDNA clone:001-131-E01, full insert sequence NA coding protein psRNATarget
XM_015787709.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:532   AGACUUUCUAGCAUUGCCCACAUU   555

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X1, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
XM_015787712.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:532   AGACUUUCUAGCAUUGCCCACAUU   555

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X4, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
XM_015769168.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:2673   AGACUUUCUAGCAUUGCCCACAUU   2696

0.0 PREDICTED: Oryza sativa Japonica Group probable splicing factor 3A subunit 1 (LOC4328860), transcript variant X3, mRNA probable splicing factor 3A subunit 1(LOC4328860) coding protein psRNATarget
XM_015763234.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||||||||
targets:6283   AGACUUUCUAGCAUUGCCCACAUU   6306

0.0 PREDICTED: Oryza sativa Japonica Group F-box protein At5g25290 (LOC4326973), transcript variant X1, mRNA F-box protein At5g25290(LOC4326973) coding protein psRNATarget
AK288214.1
ncRNA:24   UCAG-UAAGAUCGUAACGGGUGUAA   1
  ||||-|||=|||||||*||||||||
targets:2609   AGUCCAUUUUAGCAUUUCCCACAUU   2633

2.5 Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence NA coding protein psRNATarget
CT836499.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*||||||||||||=||||||
targets:474   AGACUUUCUAGCAUUGCUCACAUU   497

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA014C07, full insert sequence NA coding protein psRNATarget
CT835628.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1167   AGACUUUCUAGCAUUGUCCACAUU   1190

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042P11, full insert sequence NA coding protein psRNATarget
XM_015758512.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||||=|||||
targets:1441   AGACUUUCUAGCAUUGCCUACAUU   1464

1.5 PREDICTED: Oryza sativa Japonica Group BTB/POZ and MATH domain-containing protein 1-like (LOC107279175), mRNA BTB/POZ and MATH domain-containing protein 1-like(LOC107279175) coding protein psRNATarget
XM_015768357.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1545   AGACUUUCUAGCAUUGUCCACAUU   1568

1.5 PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X6, mRNA protein SRG1(LOC4329022) coding protein psRNATarget
XM_015768354.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1581   AGACUUUCUAGCAUUGUCCACAUU   1604

1.5 PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X3, mRNA protein SRG1(LOC4329022) coding protein psRNATarget
XM_015768355.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1595   AGACUUUCUAGCAUUGUCCACAUU   1618

1.5 PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X4, mRNA protein SRG1(LOC4329022) coding protein psRNATarget
AK065581.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1601   AGACUUUCUAGCAUUGUCCACAUU   1624

1.5 Oryza sativa Japonica Group cDNA clone:J013034J09, full insert sequence NA coding protein psRNATarget
CT832958.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*||||||=||||||||||||
targets:831   AGACUUUCUAGUAUUGCCCACAUU   854

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F21, full insert sequence NA coding protein psRNATarget
XM_015768356.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1629   AGACUUUCUAGCAUUGUCCACAUU   1652

1.5 PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X5, mRNA protein SRG1(LOC4329022) coding protein psRNATarget
XM_015768352.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1639   AGACUUUCUAGCAUUGUCCACAUU   1662

1.5 PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X1, mRNA protein SRG1(LOC4329022) coding protein psRNATarget
XM_015768353.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1651   AGACUUUCUAGCAUUGUCCACAUU   1674

1.5 PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X2, mRNA protein SRG1(LOC4329022) coding protein psRNATarget
AK065332.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*||||||=||||||||||||
targets:834   AGACUUUCUAGUAUUGCCCACAUU   857

1.5 Oryza sativa Japonica Group cDNA clone:J013000K10, full insert sequence NA coding protein psRNATarget
XM_015764678.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:1603   AGACUUUCUAGCAUUGUCCACAUU   1626

1.5 PREDICTED: Oryza sativa Japonica Group mannan endo-1,4-beta-mannosidase 8 (LOC9271116), mRNA mannan endo-1,4-beta-mannosidase 8(LOC9271116) coding protein psRNATarget
AK064411.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*||||||=||||||||||||
targets:1936   AGACUUUCUAGUAUUGCCCACAUU   1959

1.5 Oryza sativa Japonica Group cDNA clone:002-110-A07, full insert sequence NA coding protein psRNATarget
AK109758.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |*|||||=|||||||*||||||||
targets:1644   AAUCAUUUUAGCAUUUCCCACAUU   1667

2.5 Oryza sativa Japonica Group cDNA clone:002-146-G06, full insert sequence NA coding protein psRNATarget
AK073522.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*|||||||||||=|||||||
targets:2487   AGACUUUCUAGCAUUGUCCACAUU   2510

1.5 Oryza sativa Japonica Group cDNA clone:J033046G09, full insert sequence NA coding protein psRNATarget
XM_015766247.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*||=||||||||||||||||
targets:2495   AGACUUUUUAGCAUUGCCCACAUU   2518

1.0 PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107277300), mRNA putative receptor protein kinase ZmPK1(LOC107277300) coding protein psRNATarget
XM_015788932.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  |||=|||*|||||||*||||||||
targets:2899   AGUUAUUAUAGCAUUUCCCACAUU   2922

2.5 PREDICTED: Oryza sativa Japonica Group kanadaptin (LOC4340752), mRNA kanadaptin(LOC4340752) coding protein psRNATarget
AK288796.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*||||||||||||||=||||
targets:763   AGACUUUCUAGCAUUGCCCGCAUU   786

1.5 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
XM_015762769.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*||||||=||||||||||||
targets:3787   AGACUUUCUAGUAUUGCCCACAUU   3810

1.5 PREDICTED: Oryza sativa Japonica Group protein STABILIZED1 (LOC9270118), mRNA protein STABILIZED1(LOC9270118) coding protein psRNATarget
AK101040.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  ||*|*||||||=||||||||||||
targets:3856   AGACUUUCUAGUAUUGCCCACAUU   3879

1.5 Oryza sativa Japonica Group cDNA clone:J033000O03, full insert sequence NA coding protein psRNATarget
XM_015795993.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1682   GUUCUUUCUAGCAUUGCCCACGUU   1705

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X9, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795990.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1684   GUUCUUUCUAGCAUUGCCCACGUU   1707

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X6, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795989.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1704   GUUCUUUCUAGCAUUGCCCACGUU   1727

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X5, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795985.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1710   GUUCUUUCUAGCAUUGCCCACGUU   1733

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X1, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795994.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1711   GUUCUUUCUAGCAUUGCCCACGUU   1734

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X10, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795986.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1712   GUUCUUUCUAGCAUUGCCCACGUU   1735

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X2, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795992.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1714   GUUCUUUCUAGCAUUGCCCACGUU   1737

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X8, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795988.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1765   GUUCUUUCUAGCAUUGCCCACGUU   1788

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X4, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795991.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1910   GUUCUUUCUAGCAUUGCCCACGUU   1933

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X7, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
XM_015795987.1
ncRNA:24   UCAGUAAGAUCGUAACGGGUGUAA   1
  =*||*||||||||||||||||=||
targets:1965   GUUCUUUCUAGCAUUGCCCACGUU   1988

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269384 (LOC9269384), transcript variant X3, mRNA uncharacterized LOC9269384(LOC9269384) coding protein psRNATarget
© 2017 OPP-ncRBASE. All rights reserved.