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BaseInfo

ncRNA ID	novel_osa_miR3467
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:19751159-19751321 [+]
Reference genome	IRGSP-1.0
Source	SRR2040389
Length	24
Mature sequence(if miRNA)	1 - UUUACUUGCACUGUUUGAUCACUC - 24
Stem-loop(if miRNA)	--   A    C         U  C                    -----------------------      AUAUAAAAAAUGAAAAAUUA   UUU CUUG ACUGUUUGA CA UCGUCUUAUUUAAAAAAUUU                       GUGUAA                    U   ||| |||| ||||||||| || ||||||||||||||||||||                       ||||||   AAA GAAC UGACAAACU GU AGUAGAAUAAGUUUUUUAAA                       AUGAAA                    G UA   C    A         U  A                    AUCUUAAUAAUAAAAAAAACUGA      UAAUAGGUUUCAUGAAAUUC
Stem-loop sequence	UUUACUUGCACUGUUUGAUCACUCGUCUUAUUUAAAAAAUUUGUGUAAAUAUAAAAAAUGAAAAAUUAUGCUUAAAGUACUUUGGAUAAUAAAGUAAGUCAAAAAAAAUAAUAAUUCUAAAAUUUUUUGAAUAAGAUGAAUGUUCAAACAGUACAAGCAAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288846.1	ncRNA:24   CUCACUAGUUUGUCACGUUCAUUU   1   ||||||||||||||||||||*||| targets:59   GAGUGAUCAAACAGUGCAAGCAAA   82 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090075E22, full insert sequence	NA	coding protein	psRNATarget
CT837708.1	ncRNA:24   CUCACUAGUUUGUCACGUUCAUUU   1   |||||=||||||||||||||*||| targets:670   GAGUGGUCAAACAGUGCAAGCAAA   693 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA220M04, full insert sequence	NA	coding protein	psRNATarget
CT837645.1	ncRNA:24   CUCACUAGUUUGUCACGUUCAUUU   1   ||*||=|||||||||||||||||| targets:607   GAAUGGUCAAACAGUGCAAGUAAA   630 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063B15, full insert sequence	NA	coding protein	psRNATarget
AK068624.1	ncRNA:24   CUCACUAGUUUGUCACGUUCAUUU   1   |||||=||||||||||||||*||| targets:187   GAGUGGUCAAACAGUGCAAGCAAA   210 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013153F11, full insert sequence	NA	coding protein	psRNATarget
AK288203.1	ncRNA:24   CUCACUAGUUUGUCACGUUCAUUU   1   ||*||=||||||||||||||*||| targets:1705   GAAUGGUCAAACAGUGCAAGCAAA   1728 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090008K12, full insert sequence	NA	coding protein	psRNATarget
AK066510.1	ncRNA:24   CUCACUAGUUUGUCACGUUCAUUU   1   *|*||=||||||||||||||*||| targets:1426   AAAUGGUCAAACAGUGCAAGCAAA   1449 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013068L16, full insert sequence	NA	coding protein	psRNATarget
CT829507.1	ncRNA:24   CUCACUAGUUUGUCACGUUCAUUU   1   |*|||*||||*||||||||||||* targets:1405   GCGUGUUCAACCAGUGCAAGUAAU   1428 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114E15, full insert sequence	NA	coding protein	psRNATarget