ncRNA ID | novel_osa_miR3466 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:26585879-26585958 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040389;SRR2040394;SRR2040402;SRR2040411;SRR2857730;SRR2857734;SRR3123645;SRR5049789;SRR5351742;SRR1738226 |
Length | 24 |
Mature sequence(if miRNA) | 57 - AAUAAUCGGAAACGACUUGGUACC - 80 |
Stem-loop(if miRNA) |
--      A     -     CGUUGAA   A UUAGGCAGGAU   UACUAA UCGUU CCGAU       CCU G           G   |||||| ||||| |||||       ||| |   AUGGUU AGCAA GGCUA       ACC U           G CC      C     A     ----AUA   - AGAUUGUUAUA |
Stem-loop sequence | UACUAAAUCGUUCCGAUCGUUGAACCUAGUUAGGCAGGAUGGAUAUUGUUAGAUCCAAUAAUCGGAAACGACUUGGUACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289244.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J100076P10, full insert sequence | NA | coding protein | psRNATarget |