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BaseInfo

ncRNA ID	novel_osa_miR3462
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:27077775-27077878 [+]
Reference genome	IRGSP-1.0
Source	SRR1555747;SRR2097779;SRR2098560;SRR1298766;SRR2458631;SRR4407775;SRR4407953;SRR4407954;SRR4407956;SRR1556020;SRR1654490
Length	24
Mature sequence(if miRNA)	81 - AUGAAUACGGGAAAUGCUAGAAUG - 104
Stem-loop(if miRNA)	--              AC                                 G   UUCUAGCAUUUCCC  AUUCAUAUUGGUAUUAAUGAAUCUAGAUAUAUA A   ||||||||||||||  |||||||||||||||||||||||||||||||||   AAGAUCGUAAAGGG  UAAGUAUAACCAUAAUUACUUAGAUCUAUAUAU U GU              CA                                 A
Stem-loop sequence	UUCUAGCAUUUCCCACAUUCAUAUUGGUAUUAAUGAAUCUAGAUAUAUAGAUAUAUAUAUCUAGAUUCAUUAAUACCAAUAUGAAUACGGGAAAUGCUAGAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK102104.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   ||||||||=||||||||||||||| targets:644   CAUUCUAGUAUUUCCCGUAUUCAU   667 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J033084B10, full insert sequence	NA	coding protein	psRNATarget
AK067404.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   ||||||||=||||||||||||||| targets:642   CAUUCUAGUAUUUCCCGUAUUCAU   665 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013106F19, full insert sequence	NA	coding protein	psRNATarget
AK070550.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   ||||||||||||||||*||||||| targets:2619   CAUUCUAGCAUUUCCCAUAUUCAU   2642 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023061C04, full insert sequence	NA	coding protein	psRNATarget
AK099623.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   ||||||||||||||||*||||||| targets:88   CAUUCUAGCAUUUCCCAUAUUCAU   111 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013053G12, full insert sequence	NA	coding protein	psRNATarget
AK240780.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   |||||||||||||||||*|||||| targets:930   CAUUCUAGCAUUUCCCGCAUUCAU   953 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J053075H13, full insert sequence	NA	coding protein	psRNATarget
XM_015766546.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   |*||||||||||||||*||||||| targets:2701   CUUUCUAGCAUUUCCCAUAUUCAU   2724 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X1, mRNA	probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614)	coding protein	psRNATarget
XM_015766550.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   |*||||||||||||||*||||||| targets:2701   CUUUCUAGCAUUUCCCAUAUUCAU   2724 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X4, mRNA	probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614)	coding protein	psRNATarget
XM_015766551.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   |*||||||||||||||*||||||| targets:2701   CUUUCUAGCAUUUCCCAUAUUCAU   2724 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X5, mRNA	probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614)	coding protein	psRNATarget
XM_015766549.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   |*||||||||||||||*||||||| targets:2335   CUUUCUAGCAUUUCCCAUAUUCAU   2358 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X3, mRNA	probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614)	coding protein	psRNATarget
XM_015766552.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   |*||||||||||||||*||||||| targets:1721   CUUUCUAGCAUUUCCCAUAUUCAU   1744 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X6, mRNA	probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614)	coding protein	psRNATarget
XM_015766553.1	ncRNA:24   GUAAGAUCGUAAAGGGCAUAAGUA   1   |*||||||||||||||*||||||| targets:531   CUUUCUAGCAUUUCCCAUAUUCAU   554 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X7, mRNA	probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614)	coding protein	psRNATarget