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BaseInfo

ncRNA ID	novel_osa_miR3458
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:9852876-9853041 [+]
Reference genome	IRGSP-1.0
Source	SRR2040389
Length	20
Mature sequence(if miRNA)	1 - UUUACUUACACUGUUUGACC - 20
Stem-loop(if miRNA)	--   A   A                               -    -------------UGCAAAUAUAAA   AAAAAGUUAUGCCUAA   UUU CUU CACUGUUUGACCACUCGUCUUAUUCAAAAAA UUUG                         AAC                A   ||| ||| ||||||||||||||||||||||||||||||| ||||                         |||   AAA GAA GUGACAAACUGGUGAGCAGAAUAAGUUUUUU AAAC                         AUG                G AA   C   C                               U    UUUAAUAAUAAAUAAAAAAAACUGA   AAAUAAUAGGUUUCAU
Stem-loop sequence	UUUACUUACACUGUUUGACCACUCGUCUUAUUCAAAAAAUUUGUGCAAAUAUAAAAACAAAAAGUUAUGCCUAAAGUACUUUGGAUAAUAAAGUAAGUCAAAAAAAAUAAAUAAUAAUUUCAAAUUUUUUUGAAUAAGACGAGUGGUCAAACAGUGCAAGCAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164550.1	ncRNA:20   CCAGUUUGUCACAUUCAUUU   1   ||||||||||||||||*||| targets:158   GGUCAAACAGUGUAAGAAAA   177 Target Full Sequence	1.5	Sequence 2214 from Patent EP2559767	NA	coding protein	psRNATarget
HI404089.1	ncRNA:20   CCAGUUUGUCACAUUCAUUU   1   ||||||||||||||||*||| targets:158   GGUCAAACAGUGUAAGAAAA   177 Target Full Sequence	1.5	Sequence 2214 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236219.1	ncRNA:20   CCAGUUUGUCACAUUCAUUU   1   ||||||||||||||||*||| targets:158   GGUCAAACAGUGUAAGAAAA   177 Target Full Sequence	1.5	Sequence 2214 from Patent EP2985353	NA	coding protein	psRNATarget
CT837645.1	ncRNA:20   CCAGUUUGUCACAUUCAUUU   1   ||||||||||||*||||||| targets:611   GGUCAAACAGUGCAAGUAAA   630 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063B15, full insert sequence	NA	coding protein	psRNATarget