| ncRNA ID | novel_osa_miR3455 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr7:28487522-28487690 [+] |
| Reference genome | IRGSP-1.0 |
| Source | SRR2040389 |
| Length | 20 |
| Mature sequence(if miRNA) | 1 - UAUCCGUGUUCAGUUUGACC - 20 |
| Stem-loop(if miRNA) |
-- C -- C -AAAAA AAAAAAUAAAAAAAA CACACAAAAG -C UU UAU CGUGUUCA GUUUGACCGUUUGU UUAUUUGA UUGUGA UUAGU UGCUAUU AUG U ||| |||||||| |||||||||||||| |||||||| |||||| ||||| ||||||| ||| AUA GUACAAGU CAAACUGGCAAGCA AAUAAAUU AAUACU AAUCA ACGAUAA UAC U CG A UG A AAAAAA --------------- --UAAAAAUA UC UA |
| Stem-loop sequence | UAUCCGUGUUCAGUUUGACCGUUUGUCUUAUUUGAAAAAAUUGUGAAAAAAAUAAAAAAAAUUAGUCACACAAAAGUGCUAUUCAUGUUUUAUCAUCUAAUAGCAAUAAAAAUACUAAUCAUAAAAAAAAUUAAAUAAAACGAACGGUCAAACGUUGAACAUGAAUAGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015764371.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group probable rhamnogalacturonate lyase B (LOC4351416), mRNA | probable rhamnogalacturonate lyase B(LOC4351416) | coding protein | psRNATarget | |||||||||
| XM_015760513.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group probable rhamnogalacturonate lyase B (LOC4349697), mRNA | probable rhamnogalacturonate lyase B(LOC4349697) | coding protein | psRNATarget |