Search result

BaseInfo

ncRNA ID novel_osa_miR3454
Species Oryza sativa
Class miRNA
Genome position Chr7:23454654-23454699 [+]
Reference genome IRGSP-1.0
Source SRR2040389;SRR2040391
Length 21
Mature sequence(if miRNA) 1 - CGGAGAGAACUACCCAAGCCU - 21
Stem-loop(if miRNA) --C   G          A  CCU
   GGA AGAACUACCC AG   U
   ||| |||||||||| ||   G
   CCU UCUUGAUGGG UC   A
CUU   -          A  ACU
Stem-loop sequence CGGAGAGAACUACCCAAGCCUUGAUCACUAGGGUAGUUCUUCCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288317.1
ncRNA:21   UCCGAACCCAUCAAGAGAGGC   1
  |||||||||||||*|||||||
targets:2061   AGGCUUGGGUAGUCCUCUCCG   2081

1.5 Oryza sativa Japonica Group cDNA, clone: J090021K08, full insert sequence NA coding protein psRNATarget