ncRNA ID | novel_osa_miR3447 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:23376331-23376395 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040389 |
Length | 24 |
Mature sequence(if miRNA) | 42 - AUGACGUUUCUAUCCCUCACAAGU - 65 |
Stem-loop(if miRNA) |
--                   CAA  A  A  A   AUGACGUUUCUAUCCCUCA   GU CA GU G   |||||||||||||||||||   || || || A   UACUGCAAAGAUGGGGAGU   CG GU CG A UA                   -AA  -  A  U |
Stem-loop sequence | AUGACGUUUCUAUCCCUCACAAGUACAAGUAGAAUGCAUGGCAAUGAGGGGUAGAAACGUCAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015759864.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B (LOC4333190), mRNA | mitotic-spindle organizing protein 1B(LOC4333190) | coding protein | psRNATarget | |||||||||
XM_015772668.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B-like (LOC107277991), mRNA | mitotic-spindle organizing protein 1B-like(LOC107277991) | coding protein | psRNATarget |