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BaseInfo

ncRNA ID	novel_osa_miR3445
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:970740-970823 [-]
Reference genome	IRGSP-1.0
Source	SRR2040389;SRR2040395;SRR2040404;SRR3123648;SRR1738235
Length	23
Mature sequence(if miRNA)	62 - AUCGGAUGUGACAUAUUAUAGUA - 84
Stem-loop(if miRNA)	--                 A      GAUAAU         A   AUCGGAUGUGACAUAUU UAGUAU      UCUGGACGU U   ||||||||||||||||| ||||||      |||||||||   UGGUCUAUACUGUAUAG AUUAUG      AGAUUUGUA G CA                 G      AUGCUC         U
Stem-loop sequence	AUCGGAUGUGACAUAUUAUAGUAUGAUAAUUCUGGACGUAUGUAUGUUUAGACUCGUAGUAUUAGGAUAUGUCAUAUCUGGUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288995.1	ncRNA:23   AUGAUAUUAUACAGUGUAGGCUA   1   ||||||=|||||||||=|||||| targets:538   UACUAUGAUAUGUCACGUCCGAU   560 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090088A20, full insert sequence	NA	coding protein	psRNATarget
XM_015782471.1	ncRNA:23   AUGAUAUUAUACAGUGUAGGCUA   1   |||||*|||||||=||||||||| targets:1304   UACUAGAAUAUGUUACAUCCGAU   1326 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339433 (LOC4339433), mRNA	uncharacterized LOC4339433(LOC4339433)	coding protein	psRNATarget
AK107145.1	ncRNA:23   AUGAUAUUAUACAGUGUAGGCUA   1   |||||*|||||||=||||||||| targets:1264   UACUAGAAUAUGUUACAUCCGAU   1286 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-124-D07, full insert sequence	NA	coding protein	psRNATarget
XM_015763486.1	ncRNA:23   AUGAUAUUAUACAGUGUAGGCUA   1   ||=||*||||||||=|||||||| targets:1716   UAUUAGAAUAUGUCGCAUCCGAU   1738 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group purple acid phosphatase 2-like (LOC107278020), mRNA	purple acid phosphatase 2-like(LOC107278020)	coding protein	psRNATarget
XM_015769592.1	ncRNA:23   AUGAUAUUAUACAGUGUAGGCUA   1   ||=||*||||||||||||||*|| targets:402   UAUUAGAAUAUGUCACAUCCAAU   424 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group translation machinery-associated protein 7-like (LOC107277315), mRNA	translation machinery-associated protein 7-like(LOC107277315)	coding protein	psRNATarget