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BaseInfo

ncRNA ID novel_osa_miR3428
Species Oryza sativa
Class miRNA
Genome position Chr2:797082-797219 [+]
Reference genome IRGSP-1.0
Source SRR2040389
Length 24
Mature sequence(if miRNA) 1 - GUUUCACAAUGCAAGUCAUUCUAG - 24
Stem-loop(if miRNA) --    C      C    C   C   -CA     CAC         AAUA              CAUAUA
  GUUU ACAAUG AAGU AUU UAG   UUUCU   AUUCAUAUU    UUAAUGAAUCUAGA      U
  |||| |||||| |||| ||| |||   |||||   |||||||||    ||||||||||||||
  CAAA UGUUAC UUCA UAA AUC   AAAGA   UAAGUAUAA    AGUUACUUAGAUCU      A
GG    A      A    A   A   AUA     -UA         CCAC              AUCUAU
Stem-loop sequence GUUUCACAAUGCAAGUCAUUCUAGCAUUUCUCACAUUCAUAUUAAUAUUAAUGAAUCUAGACAUAUAUAUAUCUAUCUAGAUUCAUUGACACCAAUAUGAAUAUAGAAAAUACUAAAAUAACUUACAUUGUAAAACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT833788.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:450   CUAGAAUGACUUACAUUGUGAAAC   473

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA058L20, full insert sequence NA coding protein psRNATarget
CT833789.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:449   CUAGAAUGACUUACAUUGUGAAAC   472

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN032F14, full insert sequence NA coding protein psRNATarget
CT831392.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:509   CUAGAAUGACUUACAUUGUGAAAC   532

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN035F20, full insert sequence NA coding protein psRNATarget
XM_015761241.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:895   CUAGAAUGACUUACAUUGUGAAAC   918

1.5 PREDICTED: Oryza sativa Japonica Group dirigent protein 1 (LOC4350074), mRNA dirigent protein 1(LOC4350074) coding protein psRNATarget
AK287981.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1033   CUAGAAUGACUUACAUUGUGAAAC   1056

1.5 Oryza sativa Japonica Group cDNA, clone: J075085P10, full insert sequence NA coding protein psRNATarget
AK060015.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:823   CUAGAAUGACUUACAUUGUGAAAC   846

1.5 Oryza sativa Japonica Group cDNA clone:006-302-F07, full insert sequence NA coding protein psRNATarget
CT833662.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1111   CUAGAAUGACUUACAUUGUGAAAC   1134

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN049L15, full insert sequence NA coding protein psRNATarget
XM_015792529.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:41   CUAGAAUGACUUACAUUGUGAAAC   64

1.5 PREDICTED: Oryza sativa Japonica Group dehydrodolichyl diphosphate synthase 6 (LOC4343863), transcript variant X1, mRNA dehydrodolichyl diphosphate synthase 6(LOC4343863) coding protein psRNATarget
XM_015765335.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1323   CUAGAAUGACUUACAUUGUGAAAC   1346

1.5 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X2, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
AK060498.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||||||||||||||||||*||||
targets:1317   CUAGAAUGACUUGCAUUGUAAAAC   1340

1.5 Oryza sativa Japonica Group cDNA clone:001-017-D02, full insert sequence NA coding protein psRNATarget
CT837661.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1323   CUAGAAUGACUUACAUUGUGAAAC   1346

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063K17, full insert sequence NA coding protein psRNATarget
XM_015795143.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1372   CUAGAAUGACUUACAUUGUGAAAC   1395

1.5 PREDICTED: Oryza sativa Japonica Group tetraketide alpha-pyrone reductase 1 (LOC4346033), mRNA tetraketide alpha-pyrone reductase 1(LOC4346033) coding protein psRNATarget
XM_015768090.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1310   CUAGAAUGACUUACAUUGUGAAAC   1333

1.5 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X2, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
XM_015768116.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1419   CUAGAAUGACUUACAUUGUGAAAC   1442

1.5 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X5, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
AK105572.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:653   CUAGAAUGACUUACAUUGUGAAAC   676

1.5 Oryza sativa Japonica Group cDNA clone:001-128-D03, full insert sequence NA coding protein psRNATarget
AK102210.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||||||||||||||||||*||||
targets:1682   CUAGAAUGACUUGCAUUGUAAAAC   1705

1.5 Oryza sativa Japonica Group cDNA clone:J033087I04, full insert sequence NA coding protein psRNATarget
AK106586.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:711   CUAGAAUGACUUACAUUGUGAAAC   734

1.5 Oryza sativa Japonica Group cDNA clone:002-111-E12, full insert sequence NA coding protein psRNATarget
XM_015767363.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||||||||||||||||||*||||
targets:1778   CUAGAAUGACUUGCAUUGUAAAAC   1801

1.5 PREDICTED: Oryza sativa Japonica Group CAAX prenyl protease 1 homolog (LOC4330318), mRNA CAAX prenyl protease 1 homolog(LOC4330318) coding protein psRNATarget
XM_015760082.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1591   CUAGAAUGACUUACAUUGUGAAAC   1614

1.5 PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC4350193), mRNA putative protease Do-like 14(LOC4350193) coding protein psRNATarget
XM_015790275.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1804   CUAGAAUGACUUACAUUGUGAAAC   1827

1.5 PREDICTED: Oryza sativa Japonica Group alpha-humulene synthase (LOC9270657), transcript variant X2, mRNA alpha-humulene synthase(LOC9270657) coding protein psRNATarget
XM_015778179.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1725   CUAGAAUGACUUACAUUGUGAAAC   1748

1.5 PREDICTED: Oryza sativa Japonica Group methylthioribose kinase 2 (LOC107276080), mRNA methylthioribose kinase 2(LOC107276080) coding protein psRNATarget
AK071679.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1884   CUAGAAUGACUUACAUUGUGAAAC   1907

1.5 Oryza sativa Japonica Group cDNA clone:J023108I08, full insert sequence NA coding protein psRNATarget
XM_015790274.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2053   CUAGAAUGACUUACAUUGUGAAAC   2076

1.5 PREDICTED: Oryza sativa Japonica Group alpha-humulene synthase (LOC9270657), transcript variant X1, mRNA alpha-humulene synthase(LOC9270657) coding protein psRNATarget
CT837658.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2016   CUAGAAUGACUUUCAUUGUGAAAC   2039

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA248J07, full insert sequence NA coding protein psRNATarget
XM_015779938.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:985   CUAGAAUGACUUACAUUGUGAAAC   1008

1.5 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X2, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
XM_015777143.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2000   CUAGAAUGACUUACAUUGUGAAAC   2023

1.5 PREDICTED: Oryza sativa Japonica Group lecithin-cholesterol acyltransferase-like 1 (LOC4333995), mRNA lecithin-cholesterol acyltransferase-like 1(LOC4333995) coding protein psRNATarget
AK099664.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2048   CUAGAAUGACUUACAUUGUGAAAC   2071

1.5 Oryza sativa Japonica Group cDNA clone:J013066P07, full insert sequence NA coding protein psRNATarget
AK066359.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2048   CUAGAAUGACUUACAUUGUGAAAC   2071

1.5 Oryza sativa Japonica Group cDNA clone:J013066O06, full insert sequence NA coding protein psRNATarget
XM_015779937.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1077   CUAGAAUGACUUACAUUGUGAAAC   1100

1.5 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X1, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
XM_015765333.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2222   CUAGAAUGACUUACAUUGUGAAAC   2245

1.5 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X1, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
XM_015774902.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2107   CUAGAAUGACUUACAUUGUGAAAC   2130

1.5 PREDICTED: Oryza sativa Japonica Group beclin-1-like protein (LOC4333557), mRNA beclin-1-like protein(LOC4333557) coding protein psRNATarget
XM_015778310.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2212   CUAGAAUGACUUACAUUGUGAAAC   2235

1.5 PREDICTED: Oryza sativa Japonica Group gamma-glutamyltranspeptidase 1 (LOC4336033), mRNA gamma-glutamyltranspeptidase 1(LOC4336033) coding protein psRNATarget
AK106303.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1644   CUAGAAUGACUUACAUUGUGAAAC   1667

1.5 Oryza sativa Japonica Group cDNA clone:002-101-C07, full insert sequence NA coding protein psRNATarget
XM_015768099.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2606   CUAGAAUGACUUACAUUGUGAAAC   2629

1.5 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X3, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
XM_015768108.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2763   CUAGAAUGACUUACAUUGUGAAAC   2786

1.5 PREDICTED: Oryza sativa Japonica Group mediator-associated protein 2 (LOC4326241), transcript variant X4, mRNA mediator-associated protein 2(LOC4326241) coding protein psRNATarget
XM_015788932.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2972   CUAGAAUGACUUACAUUGUGAAAC   2995

1.5 PREDICTED: Oryza sativa Japonica Group kanadaptin (LOC4340752), mRNA kanadaptin(LOC4340752) coding protein psRNATarget
XM_015792577.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1468   CUAGAAUGACUUACAUUGUGAAAC   1491

1.5 PREDICTED: Oryza sativa Japonica Group calcineurin subunit B (LOC4345696), transcript variant X1, mRNA calcineurin subunit B(LOC4345696) coding protein psRNATarget
XM_015783728.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2897   CUAGAAUGACUUACAUUGUGAAAC   2920

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271594 (LOC9271594), transcript variant X1, mRNA uncharacterized LOC9271594(LOC9271594) coding protein psRNATarget
XM_015764832.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1286   CUAGAAUGACUUACAUUGUGAAAC   1309

1.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC107276755), transcript variant X2, mRNA probable LRR receptor-like serine/threonine-protein kinase At3g47570(LOC107276755) coding protein psRNATarget
AK288568.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:2878   CUAGAAUGACUUACAUUGUGAAAC   2901

1.5 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
AK288952.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:327   CUAGAAUGACUUACAUUGUGAAAC   350

1.5 Oryza sativa Japonica Group cDNA, clone: J090083K12, full insert sequence NA coding protein psRNATarget
AK289039.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:138   CUAGAAUGACUUACAUUGUGAAAC   161

1.5 Oryza sativa Japonica Group cDNA, clone: J090091N23, full insert sequence NA coding protein psRNATarget
XM_015778291.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:132   CUAGAAUGACUUACAUUGUGAAAC   155

1.5 PREDICTED: Oryza sativa Japonica Group protein LURP-one-related 6 (LOC4335964), mRNA protein LURP-one-related 6(LOC4335964) coding protein psRNATarget
XM_015761673.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:5727   CUAGAAUGACUUACAUUGUGAAAC   5750

1.5 PREDICTED: Oryza sativa Japonica Group regulatory-associated protein of TOR 2 (LOC9266997), transcript variant X2, mRNA regulatory-associated protein of TOR 2(LOC9266997) coding protein psRNATarget
XM_015761673.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =|||||||||||*|||||||||||
targets:5849   UUAGAAUGACUUACAUUGUGAAAC   5872

1.5 PREDICTED: Oryza sativa Japonica Group regulatory-associated protein of TOR 2 (LOC9266997), transcript variant X2, mRNA regulatory-associated protein of TOR 2(LOC9266997) coding protein psRNATarget
XM_015761672.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:5731   CUAGAAUGACUUACAUUGUGAAAC   5754

1.5 PREDICTED: Oryza sativa Japonica Group regulatory-associated protein of TOR 2 (LOC9266997), transcript variant X1, mRNA regulatory-associated protein of TOR 2(LOC9266997) coding protein psRNATarget
XM_015761672.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =|||||||||||*|||||||||||
targets:5853   UUAGAAUGACUUACAUUGUGAAAC   5876

1.5 PREDICTED: Oryza sativa Japonica Group regulatory-associated protein of TOR 2 (LOC9266997), transcript variant X1, mRNA regulatory-associated protein of TOR 2(LOC9266997) coding protein psRNATarget
XM_015787270.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*|||||||||||
targets:1638   CUAGAAUGACUUACAUUGUGAAAC   1661

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4341670 (LOC4341670), transcript variant X1, mRNA uncharacterized LOC4341670(Os06g0647801) coding protein psRNATarget
CT837739.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =|||||||||||*|||||||||||
targets:1475   UUAGAAUGACUUACAUUGUGAAAC   1498

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA048L02, full insert sequence NA coding protein psRNATarget
XM_015795314.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =|||||||||||*|||||||||||
targets:1838   UUAGAAUGACUUACAUUGUGAAAC   1861

1.5 PREDICTED: Oryza sativa Japonica Group cytochrome P450 89A2 (LOC4344671), mRNA cytochrome P450 89A2(LOC4344671) coding protein psRNATarget
AK069916.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*||||||||||=
targets:1975   CUAGAAUGACUUACAUUGUGAAAU   1998

2.5 Oryza sativa Japonica Group cDNA clone:J023038C16, full insert sequence NA coding protein psRNATarget
XM_015763894.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*||||||||||=
targets:1989   CUAGAAUGACUUACAUUGUGAAAU   2012

2.5 PREDICTED: Oryza sativa Japonica Group ureide permease 2 (LOC4352286), mRNA ureide permease 2(LOC4352286) coding protein psRNATarget
AK070550.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =|||||||||||*|||||||||||
targets:2711   UUAGAAUGACUUACAUUGUGAAAC   2734

1.5 Oryza sativa Japonica Group cDNA clone:J023061C04, full insert sequence NA coding protein psRNATarget
AK288390.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*||||||||||=
targets:598   CUAGAAUGACUUACAUUGUGAAAU   621

2.5 Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence NA coding protein psRNATarget
XM_015790773.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  *|||||||||||*|||||||||||
targets:1321   GUAGAAUGACUUACAUUGUGAAAC   1344

1.5 PREDICTED: Oryza sativa Japonica Group peroxidase 1-like (LOC107275918), mRNA peroxidase 1-like(LOC107275918) coding protein psRNATarget
XM_015788097.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  *|||||||||||*|||||||||||
targets:1679   AUAGAAUGACUUACAUUGUGAAAC   1702

1.5 PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL46 (LOC4340250), mRNA RING-H2 finger protein ATL46(LOC4340250) coding protein psRNATarget
AK064965.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  *|||||||||||*|||||||||||
targets:1731   AUAGAAUGACUUACAUUGUGAAAC   1754

1.5 Oryza sativa Japonica Group cDNA clone:J013001B01, full insert sequence NA coding protein psRNATarget
AK099681.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*||||||||||*
targets:1861   CUAGAAUGACUUACAUUGUGAAAA   1884

2.5 Oryza sativa Japonica Group cDNA clone:J013071F22, full insert sequence NA coding protein psRNATarget
XM_015795234.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||||*||||||||||*
targets:1852   CUAGAAUGACUUACAUUGUGAAAA   1875

2.5 PREDICTED: Oryza sativa Japonica Group glycoprotein 3-alpha-L-fucosyltransferase A (LOC4345809), mRNA glycoprotein 3-alpha-L-fucosyltransferase A(LOC4345809) coding protein psRNATarget
XM_015760745.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  *|||||||||||*|||||||||||
targets:10   AUAGAAUGACUUACAUUGUGAAAC   33

1.5 PREDICTED: Oryza sativa Japonica Group ankyrin repeat-containing protein At5g02620-like (LOC107276481), mRNA ankyrin repeat-containing protein At5g02620-like(LOC107276481) coding protein psRNATarget
AK289050.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  *|||||||||||*|||||||||||
targets:4466   AUAGAAUGACUUACAUUGUGAAAC   4489

1.5 Oryza sativa Japonica Group cDNA, clone: J090092O13, full insert sequence NA coding protein psRNATarget
XM_015778842.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =||||||||=||*|||||||||||
targets:1180   UUAGAAUGAUUUACAUUGUGAAAC   1203

2.5 PREDICTED: Oryza sativa Japonica Group putative RING-H2 finger protein ATL50 (LOC4336763), mRNA putative RING-H2 finger protein ATL50(LOC4336763) coding protein psRNATarget
CT835025.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:291   CUAAAAUGACUUACAUUGUGAAAC   314

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI029L19, full insert sequence NA coding protein psRNATarget
CT837577.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:301   CUAAAAUGACUUACAUUGUGAAAC   324

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN009E14, full insert sequence NA coding protein psRNATarget
XM_015783507.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:862   CUAAAAUGACUUACAUUGUGAAAC   885

1.5 PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor ERF014-like (LOC107277887), mRNA ethylene-responsive transcription factor ERF014-like(LOC107277887) coding protein psRNATarget
AK242637.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:694   CUAAAAUGACUUACAUUGUGAAAC   717

1.5 Oryza sativa Japonica Group cDNA, clone: J090023H18, full insert sequence NA coding protein psRNATarget
CT837490.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:934   CUAAAAUGACUUACAUUGUGAAAC   957

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F07, full insert sequence NA coding protein psRNATarget
AK288502.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  ||||||||||*|*|||||||||||
targets:671   CUAGAAUGACAUACAUUGUGAAAC   694

2.5 Oryza sativa Japonica Group cDNA, clone: J090041D12, full insert sequence NA coding protein psRNATarget
AK288854.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:293   CUAAAAUGACUUACAUUGUGAAAC   316

1.5 Oryza sativa Japonica Group cDNA, clone: J090075O17, full insert sequence NA coding protein psRNATarget
AK241002.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:1708   CUACAAUGACUUACAUUGUGAAAC   1731

1.5 Oryza sativa Japonica Group cDNA, clone: J065053D12, full insert sequence NA coding protein psRNATarget
AK099655.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||||||||*||*|||||||||||
targets:775   CUAGAAUGAAUUACAUUGUGAAAC   798

2.5 Oryza sativa Japonica Group cDNA clone:J013066C07, full insert sequence NA coding protein psRNATarget
AK067404.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||||||*||||*|||||||||||
targets:731   CUAGAAUAACUUACAUUGUGAAAC   754

2.5 Oryza sativa Japonica Group cDNA clone:J013106F19, full insert sequence NA coding protein psRNATarget
AK102955.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:866   CUAAAAUGACUUACAUUGUGAAAC   889

1.5 Oryza sativa Japonica Group cDNA clone:J033115G04, full insert sequence NA coding protein psRNATarget
XM_015763581.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:1774   CUACAAUGACUUACAUUGUGAAAC   1797

1.5 PREDICTED: Oryza sativa Japonica Group benzyl alcohol O-benzoyltransferase-like (LOC107276754), mRNA benzyl alcohol O-benzoyltransferase-like(LOC107276754) coding protein psRNATarget
XM_015759908.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:991   CUAAAAUGACUUACAUUGUGAAAC   1014

1.5 PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC4350124), mRNA disease resistance protein RPM1(LOC4350124) coding protein psRNATarget
AK102104.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||||||*||||*|||||||||||
targets:733   CUAGAAUAACUUACAUUGUGAAAC   756

2.5 Oryza sativa Japonica Group cDNA clone:J033084B10, full insert sequence NA coding protein psRNATarget
XM_015780917.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:4777   CUAAAAUGACUUACAUUGUGAAAC   4800

1.5 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X2, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780918.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:4826   CUAAAAUGACUUACAUUGUGAAAC   4849

1.5 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X3, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780916.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:4835   CUAAAAUGACUUACAUUGUGAAAC   4858

1.5 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X1, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
AK288988.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:997   CUAAAAUGACUUACAUUGUGAAAC   1020

1.5 Oryza sativa Japonica Group cDNA, clone: J090086L17, full insert sequence NA coding protein psRNATarget
AK121342.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:4687   CUAAAAUGACUUACAUUGUGAAAC   4710

1.5 Oryza sativa Japonica Group cDNA clone:J023121A11, full insert sequence NA coding protein psRNATarget
XM_015789040.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*|||||||||||
targets:4853   CUAAAAUGACUUACAUUGUGAAAC   4876

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266525 (LOC9266525), transcript variant X1, mRNA uncharacterized LOC9266525(LOC9266525) coding protein psRNATarget
CT837528.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*||||||||||=
targets:925   CUAAAAUGACUUACAUUGUGAAAU   948

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN037B21, full insert sequence NA coding protein psRNATarget
AK287994.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*||||||||||=
targets:1562   CUAAAAUGACUUACAUUGUGAAAU   1585

2.5 Oryza sativa Japonica Group cDNA, clone: J075099E21, full insert sequence NA coding protein psRNATarget
XM_015782137.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  |||*||||||||*||||||||||=
targets:1611   CUAAAAUGACUUACAUUGUGAAAU   1634

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339294 (LOC4339294), mRNA uncharacterized LOC4339294(LOC4339294) coding protein psRNATarget
AK060965.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =||*||||||||*|||||||||||
targets:1630   UUAAAAUGACUUACAUUGUGAAAC   1653

1.5 Oryza sativa Japonica Group cDNA clone:006-202-B11, full insert sequence NA coding protein psRNATarget
XM_015764593.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =||*||||||||*|||||||||||
targets:1630   UUAAAAUGACUUACAUUGUGAAAC   1653

1.5 PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 91C1 (LOC4352520), mRNA UDP-glycosyltransferase 91C1(LOC4352520) coding protein psRNATarget
AK121202.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =||*||||||||*|||||||||||
targets:1630   UUAAAAUGACUUACAUUGUGAAAC   1653

1.5 Oryza sativa Japonica Group cDNA clone:J023087K24, full insert sequence NA coding protein psRNATarget
AK288811.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =||||||*||||*|||||||||||
targets:1425   UUAGAAUAACUUACAUUGUGAAAC   1448

2.5 Oryza sativa Japonica Group cDNA, clone: J090072B06, full insert sequence NA coding protein psRNATarget
AK058488.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =*|*||||||||*|||||||||||
targets:356   UAAUAAUGACUUACAUUGUGAAAC   379

1.5 Oryza sativa Japonica Group cDNA clone:001-016-D11, full insert sequence NA coding protein psRNATarget
AK110875.1
ncRNA:24   GAUCUUACUGAACGUAACACUUUG   1
  =||*=|||||||*||||||||||*
targets:620   UUAUGAUGACUUCCAUUGUGAAAG   643

2.5 Oryza sativa Japonica Group cDNA clone:002-172-G02, full insert sequence NA coding protein psRNATarget
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