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BaseInfo

ncRNA ID novel_osa_miR3415
Species Oryza sativa
Class miRNA
Genome position Chr1:24432206-24432391 [+]
Reference genome IRGSP-1.0
Source SRR2040389;SRR1612404
Length 24
Mature sequence(if miRNA) 163 - UGUAUGAUGGCAUUUCAUGGAACU - 186
Stem-loop(if miRNA) --      A                A       A          A    C              --CCCAAU   GCG           ACUGUU
  UUCCAU AAAUGCCAUCGUACAA CGAUUUU UCUCAGAAAU CCAU GCUGUUAGGGUUCC        CCC   CCGUUAAGUGC      C
  |||||| |||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||        |||   |||||||||||
  AAGGUA UUUACGGUAGUAUGUU GUUGAAA AGGGUUUUUA GGUA CGGCAAUCCCAAGG        GGG   GGCAAUUCACG      A
UC      C                C       C          C    A              UAAUCGUC   --A           AUUCCU
Stem-loop sequence UUCCAUAAAAUGCCAUCGUACAAACGAUUUUAUCUCAGAAAUACCAUCGCUGUUAGGGUUCCCCCAAUCCCGCGCCGUUAAGUGCACUGUUCAUCCUUAGCACUUAACGGAGGGCUGCUAAUGGAACCCUAACGGCAAUGGCAUUUUUGGGACAAAGUUGCUUGUAUGAUGGCAUUUCAUGGAACU