ncRNA ID | novel_osa_miR3415 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:24432206-24432391 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040389;SRR1612404 |
Length | 24 |
Mature sequence(if miRNA) | 163 - UGUAUGAUGGCAUUUCAUGGAACU - 186 |
Stem-loop(if miRNA) |
--      A                A       A          A    C              --CCCAAU   GCG           ACUGUU   UUCCAU AAAUGCCAUCGUACAA CGAUUUU UCUCAGAAAU CCAU GCUGUUAGGGUUCC        CCC   CCGUUAAGUGC      C   |||||| |||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||        |||   |||||||||||   AAGGUA UUUACGGUAGUAUGUU GUUGAAA AGGGUUUUUA GGUA CGGCAAUCCCAAGG        GGG   GGCAAUUCACG      A UC      C                C       C          C    A              UAAUCGUC   --A           AUUCCU |
Stem-loop sequence | UUCCAUAAAAUGCCAUCGUACAAACGAUUUUAUCUCAGAAAUACCAUCGCUGUUAGGGUUCCCCCAAUCCCGCGCCGUUAAGUGCACUGUUCAUCCUUAGCACUUAACGGAGGGCUGCUAAUGGAACCCUAACGGCAAUGGCAUUUUUGGGACAAAGUUGCUUGUAUGAUGGCAUUUCAUGGAACU |