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BaseInfo

ncRNA ID	novel_osa_miR3407
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:21171723-21171800 [+]
Reference genome	IRGSP-1.0
Source	SRR1555747;SRR1556020
Length	24
Mature sequence(if miRNA)	55 - UGUGUUAAAUCGGCCGCCAGUGAA - 78
Stem-loop(if miRNA)	--             A    G        C     A  U   CGCUGGCGGUUGG UUAA ACGGCCGC AGCGA AA A   ||||||||||||| |||| |||||||| ||||| ||   GUGACCGCCGGCU AAUU UGUCGGCG UCGCU UU A AA             A    G        A     A  A
Stem-loop sequence	CGCUGGCGGUUGGAUUAAGACGGCCGCCAGCGAAAAUAAAUUAUCGCUAGCGGCUGUGUUAAAUCGGCCGCCAGUGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164887.1	ncRNA:24   AAGUGACCGCCGGCUAAAUUGUGU   1   ||==|||||||=|||||||||||| targets:12   UUUGCUGGCGGUCGAUUUAACACA   35 Target Full Sequence	1.5	Sequence 2551 from Patent EP2559767	NA	coding protein	psRNATarget
HI404426.1	ncRNA:24   AAGUGACCGCCGGCUAAAUUGUGU   1   ||==|||||||=|||||||||||| targets:12   UUUGCUGGCGGUCGAUUUAACACA   35 Target Full Sequence	1.5	Sequence 2551 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236556.1	ncRNA:24   AAGUGACCGCCGGCUAAAUUGUGU   1   ||==|||||||=|||||||||||| targets:12   UUUGCUGGCGGUCGAUUUAACACA   35 Target Full Sequence	1.5	Sequence 2551 from Patent EP2985353	NA	coding protein	psRNATarget
HI403624.1	ncRNA:24   AAGUGACCGCCGGCUAAAUUGUGU   1   |||=||||||||||||*||||||| targets:12   UUCGCUGGCGGCCGAUAUAACACA   35 Target Full Sequence	1.5	Sequence 1749 from Patent EP2074227	NA	coding protein	psRNATarget
JB164085.1	ncRNA:24   AAGUGACCGCCGGCUAAAUUGUGU   1   |||=||||||||||||*||||||| targets:12   UUCGCUGGCGGCCGAUAUAACACA   35 Target Full Sequence	1.5	Sequence 1749 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235754.1	ncRNA:24   AAGUGACCGCCGGCUAAAUUGUGU   1   |||=||||||||||||*||||||| targets:12   UUCGCUGGCGGCCGAUAUAACACA   35 Target Full Sequence	1.5	Sequence 1749 from Patent EP2985353	NA	coding protein	psRNATarget