ncRNA ID | novel_osa_miR3401 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:20828858-20828989 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555747;SRR2097778;SRR2099428;SRR1556011;SRR4407953;SRR4407961;SRR1556020 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGCAGACGGGAUCUCGACCUC - 21 |
Stem-loop(if miRNA) |
--     A     U    A          CAUA       A             U  C    UU U   AGCAG CGGGA CUCG CCUCGACAUU    UCCCACU GAACUUGCUACCG UG CACU  C U   ||||| ||||| |||| ||||||||||    ||||||| ||||||||||||| || ||||  |   UCGUC GCCCU GAGC GGAGUUGUAG    AGGGUGA CUUGAACGAUGGU AC GUGA  G A CC     G     U    C          UCAC       G             U  A    UU U |
Stem-loop sequence | AGCAGACGGGAUCUCGACCUCGACAUUCAUAUCCCACUAGAACUUGCUACCGUUGCCACUUUCUUAUGUUAGUGACAUUGGUAGCAAGUUCGAGUGGGACACUGAUGUUGAGGCCGAGUUCCCGGCUGCUCC |