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BaseInfo

ncRNA ID novel_osa_miR3401
Species Oryza sativa
Class miRNA
Genome position Chr11:20828858-20828989 [+]
Reference genome IRGSP-1.0
Source SRR1555747;SRR2097778;SRR2099428;SRR1556011;SRR4407953;SRR4407961;SRR1556020
Length 21
Mature sequence(if miRNA) 1 - AGCAGACGGGAUCUCGACCUC - 21
Stem-loop(if miRNA) --     A     U    A          CAUA       A             U  C    UU U
  AGCAG CGGGA CUCG CCUCGACAUU    UCCCACU GAACUUGCUACCG UG CACU  C U
  ||||| ||||| |||| ||||||||||    ||||||| ||||||||||||| || ||||  |
  UCGUC GCCCU GAGC GGAGUUGUAG    AGGGUGA CUUGAACGAUGGU AC GUGA  G A
CC     G     U    C          UCAC       G             U  A    UU U
Stem-loop sequence AGCAGACGGGAUCUCGACCUCGACAUUCAUAUCCCACUAGAACUUGCUACCGUUGCCACUUUCUUAUGUUAGUGACAUUGGUAGCAAGUUCGAGUGGGACACUGAUGUUGAGGCCGAGUUCCCGGCUGCUCC