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BaseInfo

ncRNA ID	novel_osa_miR3380
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:6581026-6581080 [+]
Reference genome	IRGSP-1.0
Source	SRR1555747;SRR2099567;SRR2099745;SRR4407958;SRR1556020;SRR1654491
Length	24
Mature sequence(if miRNA)	1 - AUAAAGGAUUUUGGAUAGAUGGGA - 24
Stem-loop(if miRNA)	-AUA   -           G            AAG GAUUUUGGAUA AUGGGACA     ||| ||||||||||| |||||||C     UUC CUGAAAUCUAU UACUCUGU UAUA   A           A
Stem-loop sequence	AUAAAGGAUUUUGGAUAGAUGGGACACUGUCUCAUAUAUCUAAAGUCACUUAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015775487.1	ncRNA:24   AGGGUAGAUAGGUUUUAGGAAAUA   1   ||*||||||*|||||||||*|||| targets:2633   UCACAUCUACCCAAAAUCCCUUAU   2656 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group histone-lysine N-methyltransferase EZ3 (LOC4332612), transcript variant X2, mRNA	histone-lysine N-methyltransferase EZ3(LOC4332612)	coding protein	psRNATarget
XM_015775486.1	ncRNA:24   AGGGUAGAUAGGUUUUAGGAAAUA   1   ||*||||||*|||||||||*|||| targets:3204   UCACAUCUACCCAAAAUCCCUUAU   3227 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group histone-lysine N-methyltransferase EZ3 (LOC4332612), transcript variant X1, mRNA	histone-lysine N-methyltransferase EZ3(LOC4332612)	coding protein	psRNATarget
XM_015782022.1	ncRNA:24   AGGGUAGAUAGGUUUUAGGAAAUA   1   ||*|=||*|*|||||||||||||| targets:1614   UCACGUCCACCCAAAAUCCUUUAU   1637 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group zinc transporter 9 (LOC4339080), transcript variant X1, mRNA	zinc transporter 9(LOC4339080)	coding protein	psRNATarget
XM_015782023.1	ncRNA:24   AGGGUAGAUAGGUUUUAGGAAAUA   1   ||*|=||*|*|||||||||||||| targets:2656   UCACGUCCACCCAAAAUCCUUUAU   2679 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group zinc transporter 9 (LOC4339080), transcript variant X2, mRNA	zinc transporter 9(LOC4339080)	coding protein	psRNATarget