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BaseInfo

ncRNA ID	novel_osa_miR3364
Species	Oryza sativa
Class	miRNA
Genome position	Chr5:20476044-20476155 [+]
Reference genome	IRGSP-1.0
Source	SRR2040388
Length	21
Mature sequence(if miRNA)	1 - UAUAGCAAUCUAGUACCGGAU - 21
Stem-loop(if miRNA)	--           A                         C               G   UAUAGCAAUCU GUACCGGAUGGGAUAUCUCAUAGUA AAUGAAUCUGGACAG A   ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| G   AUAUCGUUGGA CAUGGCCUACCCUGUAGAGUAUCAU UUACUUAGAUCUGUU G UU           -                         A               G
Stem-loop sequence	UAUAGCAAUCUAGUACCGGAUGGGAUAUCUCAUAGUACAAUGAAUCUGGACAGGAGGGUUGUCUAGAUUCAUUAUACUAUGAGAUGUCCCAUCCGGUACAGGUUGCUAUAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403973.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   ||||||||||||||||=|||| targets:115   AUCCGGUACUAGAUUGUUAUA   135 Target Full Sequence	1.5	Sequence 2098 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236103.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   ||||||||||||||||=|||| targets:115   AUCCGGUACUAGAUUGUUAUA   135 Target Full Sequence	1.5	Sequence 2098 from Patent EP2985353	NA	coding protein	psRNATarget
JB164434.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   ||||||||||||||||=|||| targets:115   AUCCGGUACUAGAUUGUUAUA   135 Target Full Sequence	1.5	Sequence 2098 from Patent EP2559767	NA	coding protein	psRNATarget
JB164563.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   |||||||*||||=|||||||| targets:115   AUCCGGUUCUAGGUUGCUAUA   135 Target Full Sequence	2.5	Sequence 2227 from Patent EP2559767	NA	coding protein	psRNATarget
HI404102.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   |||||||*||||=|||||||| targets:115   AUCCGGUUCUAGGUUGCUAUA   135 Target Full Sequence	2.5	Sequence 2227 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236232.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   |||||||*||||=|||||||| targets:115   AUCCGGUUCUAGGUUGCUAUA   135 Target Full Sequence	2.5	Sequence 2227 from Patent EP2985353	NA	coding protein	psRNATarget
AK100614.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   ||||*|||||||=|||||||| targets:1620   AUCCAGUACUAGGUUGCUAUA   1640 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023108A15, full insert sequence	NA	coding protein	psRNATarget
AK288458.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   =|||*|||=|||||||||||| targets:417   GUCCUGUAUUAGAUUGCUAUA   437 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090035E13, full insert sequence	NA	coding protein	psRNATarget
JB164358.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   |||=*||*||||||||||||| targets:72   AUCUAGUCCUAGAUUGCUAUA   92 Target Full Sequence	3.0	Sequence 2022 from Patent EP2559767	NA	coding protein	psRNATarget
HI403897.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   |||=*||*||||||||||||| targets:72   AUCUAGUCCUAGAUUGCUAUA   92 Target Full Sequence	3.0	Sequence 2022 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236027.1	ncRNA:21   UAGGCCAUGAUCUAACGAUAU   1   |||=*||*||||||||||||| targets:72   AUCUAGUCCUAGAUUGCUAUA   92 Target Full Sequence	3.0	Sequence 2022 from Patent EP2985353	NA	coding protein	psRNATarget