ncRNA ID | novel_osa_miR3355 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:11341965-11342075 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040388 |
Length | 24 |
Mature sequence(if miRNA) | 88 - UUGCGACACAAAUCUUUUGAGCCU - 111 |
Stem-loop(if miRNA) |
--      C  A     U     C       UG  AUA   U A    ---G        UUGCGA AC AAUCU UUGAG CUAAUUA  CC   AUU G CAAU    UGCUGC   |||||| || ||||| ||||| |||||||  ||   ||| | ||||    |||||U   GACGCU UG UUAGA AAUUC GAUUGAU  GG   UAA C GUUA    AUGACA UU      C  C     U     A       UA  CAG   U -    AUAA      |
Stem-loop sequence | UUGCGACACAAAUCUUUUGAGCCUAAUUAUGCCAUAAUUUGACAAUGUGCUGCUACAGUAAAUAAUUGCUAAUGACGGAUUAGUUAGACUUAAUAGAUUCGUCUCGCAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT837754.1 |
|
1.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120A23, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288772.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090068C09, full insert sequence | NA | coding protein | psRNATarget |