Search result

BaseInfo

ncRNA ID novel_osa_miR3346
Species Oryza sativa
Class miRNA
Genome position Chr2:8947865-8947950 [-]
Reference genome IRGSP-1.0
Source SRR2040388
Length 24
Mature sequence(if miRNA) 63 - AUUGCCCACAUUCAUAUAGAUGCU - 86
Stem-loop(if miRNA) --    C    A                 U      GAC  UA
  AUUG CCAC UUCAUAUAGAUGCUAAU AAUCUA   AU  U
  |||| |||| ||||||||||||||||| ||||||   ||
  UAAC GGUG AAGUAUAUCUACGAUUA UUAGAU   UA  U
CG    A    G                 C      AUA  UA
Stem-loop sequence AUUGCCCACAUUCAUAUAGAUGCUAAUUAAUCUAGACAUUAUUAUAUAUAUAGAUUCAUUAGCAUCUAUAUGAAGGUGGACAAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK069041.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  ||||||||||||||||||||||||
targets:2219   AGCAUCUAUAUGAAUGUGGGCAAU   2242

0.0 Oryza sativa Japonica Group cDNA clone:J023004J15, full insert sequence NA coding protein psRNATarget
AK069797.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||||||||||||||||||
targets:448   AACAUCUAUAUGAAUGUGGGCAAU   471

0.0 Oryza sativa Japonica Group cDNA clone:J023028A18, full insert sequence NA coding protein psRNATarget
AK318573.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||||||||||||||||||
targets:335   AACAUCUAUAUGAAUGUGGGCAAU   358

0.0 Oryza sativa Japonica Group cDNA, clone: J090044A16, full insert sequence NA coding protein psRNATarget
XM_015756036.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||||||||||||||||||
targets:15   AACAUCUAUAUGAAUGUGGGCAAU   38

0.0 PREDICTED: Oryza sativa Japonica Group PHD finger protein MALE STERILITY 1 (LOC4347213), mRNA PHD finger protein MALE STERILITY 1(LOC4347213) coding protein psRNATarget
XM_015765335.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||||||||||||||=|||
targets:1268   AACAUCUAUAUGAAUGUGGGUAAU   1291

1.5 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X2, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
XM_015765333.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||||||||||||||=|||
targets:2167   AACAUCUAUAUGAAUGUGGGUAAU   2190

1.5 PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X1, mRNA light-inducible protein CPRF2-like(LOC107276775) coding protein psRNATarget
XM_015769168.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  ||=||||||||*||||||||||||
targets:2745   AGUAUCUAUAUAAAUGUGGGCAAU   2768

1.5 PREDICTED: Oryza sativa Japonica Group probable splicing factor 3A subunit 1 (LOC4328860), transcript variant X3, mRNA probable splicing factor 3A subunit 1(LOC4328860) coding protein psRNATarget
XM_015766553.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||||||*
targets:600   AACAUCUAUAUGAAUGUGGGCAAC   623

1.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X7, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766552.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||||||*
targets:1790   AACAUCUAUAUGAAUGUGGGCAAC   1813

1.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X6, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766549.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||||||*
targets:2404   AACAUCUAUAUGAAUGUGGGCAAC   2427

1.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X3, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766551.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||||||*
targets:2770   AACAUCUAUAUGAAUGUGGGCAAC   2793

1.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X5, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766550.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||||||*
targets:2770   AACAUCUAUAUGAAUGUGGGCAAC   2793

1.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X4, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766546.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||||||*
targets:2770   AACAUCUAUAUGAAUGUGGGCAAC   2793

1.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X1, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
AK104174.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||=||||||||||||=|||
targets:735   AACAUCUGUAUGAAUGUGGGUAAU   758

2.5 Oryza sativa Japonica Group cDNA clone:006-301-C05, full insert sequence NA coding protein psRNATarget
AK067462.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||=||||||||||||=|||
targets:736   AACAUCUGUAUGAAUGUGGGUAAU   759

2.5 Oryza sativa Japonica Group cDNA clone:J013102C12, full insert sequence NA coding protein psRNATarget
AK071843.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||=||||||||||||=|||
targets:870   AACAUCUGUAUGAAUGUGGGUAAU   893

2.5 Oryza sativa Japonica Group cDNA clone:J023117M08, full insert sequence NA coding protein psRNATarget
CT834453.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||=||||||||||||=|||
targets:868   AACAUCUGUAUGAAUGUGGGUAAU   891

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115M14, full insert sequence NA coding protein psRNATarget
XM_015772707.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||=||||||||||||=|||
targets:1061   AACAUCUGUAUGAAUGUGGGUAAU   1084

2.5 PREDICTED: Oryza sativa Japonica Group protein ELF4-LIKE 3 (LOC4333090), mRNA protein ELF4-LIKE 3(LOC4333090) coding protein psRNATarget
CT835706.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||||||||||||*|||||
targets:558   AACAUCUAUAUGAAUGUGAGCAAU   581

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN081F23, full insert sequence NA coding protein psRNATarget
AK287948.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*||||||||||||||||||
targets:927   AACAUAUAUAUGAAUGUGGGCAAU   950

1.0 Oryza sativa Japonica Group cDNA, clone: J075028D01, full insert sequence NA coding protein psRNATarget
CT837804.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*||||||||||||||||||
targets:940   AACAUAUAUAUGAAUGUGGGCAAU   963

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115N24, full insert sequence NA coding protein psRNATarget
CT836330.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||*||||||||
targets:893   AACAUCUAUAUGAAUAUGGGCAAU   916

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN072K19, full insert sequence NA coding protein psRNATarget
XM_015795948.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*||||||||||||||||||
targets:1077   AACAUAUAUAUGAAUGUGGGCAAU   1100

1.0 PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L18a-like protein (LOC4326318), mRNA 60S ribosomal protein L18a-like protein(LOC4326318) coding protein psRNATarget
AK241537.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||*||||||||
targets:895   AACAUCUAUAUGAAUAUGGGCAAU   918

1.5 Oryza sativa Japonica Group cDNA, clone: J065173J04, full insert sequence NA coding protein psRNATarget
XM_015769449.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||||||||||||*|||||
targets:155   AACAUCUAUAUGAAUGUGAGCAAU   178

1.5 PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor ERF018-like (LOC107278604), mRNA ethylene-responsive transcription factor ERF018-like(LOC107278604) coding protein psRNATarget
AK120148.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||*||||
targets:535   AACAUCUAUAUGAAUGUGGACAAU   558

1.5 Oryza sativa Japonica Group cDNA clone:J013029J05, full insert sequence NA coding protein psRNATarget
AK106777.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||*||||
targets:1361   AACAUCUAUAUGAAUGUGGCCAAU   1384

1.5 Oryza sativa Japonica Group cDNA clone:002-115-G12, full insert sequence NA coding protein psRNATarget
XM_015760503.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||||||||||||*|||||
targets:2462   AACAUCUAUAUGAAUGUGAGCAAU   2485

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277162 (LOC107277162), transcript variant X1, mRNA uncharacterized LOC107277162(LOC107277162) coding protein psRNATarget
XM_015766247.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*||||||||||||||||||
targets:2567   AACAUAUAUAUGAAUGUGGGCAAU   2590

1.0 PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107277300), mRNA putative receptor protein kinase ZmPK1(LOC107277300) coding protein psRNATarget
AK242012.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||*||||||||||||
targets:741   AACAUCUAUAUAAAUGUGGGCAAU   764

1.5 Oryza sativa Japonica Group cDNA, clone: J075106H22, full insert sequence NA coding protein psRNATarget
AK288429.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||*||||||||
targets:2543   AACAUCUAUAUGAAUAUGGGCAAU   2566

1.5 Oryza sativa Japonica Group cDNA, clone: J090033C09, full insert sequence NA coding protein psRNATarget
XM_015786027.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||*||||||||
targets:4312   AACAUCUAUAUGAAUAUGGGCAAU   4335

1.5 PREDICTED: Oryza sativa Japonica Group ABC transporter C family member 8 (LOC9267441), mRNA ABC transporter C family member 8(LOC9267441) coding protein psRNATarget
XM_015769825.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||*||||||||||||
targets:2136   AACAUCUAUAUAAAUGUGGGCAAU   2159

1.5 PREDICTED: Oryza sativa Japonica Group BTB/POZ domain-containing protein At4g30940 (LOC4329965), mRNA BTB/POZ domain-containing protein At4g30940(LOC4329965) coding protein psRNATarget
AK288216.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||*||||||||||||
targets:2141   AACAUCUAUAUAAAUGUGGGCAAU   2164

1.5 Oryza sativa Japonica Group cDNA, clone: J090011C22, full insert sequence NA coding protein psRNATarget
XM_015763234.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||||||||||||||||*||||
targets:6355   AACAUCUAUAUGAAUGUGGACAAU   6378

1.5 PREDICTED: Oryza sativa Japonica Group F-box protein At5g25290 (LOC4326973), transcript variant X1, mRNA F-box protein At5g25290(LOC4326973) coding protein psRNATarget
XM_015791317.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*||||||||||||||||||
targets:4510   AACAUAUAUAUGAAUGUGGGCAAU   4533

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342778 (LOC4342778), transcript variant X1, mRNA uncharacterized LOC4342778(Os07g0231700) coding protein psRNATarget
AK071625.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  **|||*||||||||||||||||||
targets:1354   UACAUAUAUAUGAAUGUGGGCAAU   1377

1.0 Oryza sativa Japonica Group cDNA clone:J023106F16, full insert sequence NA coding protein psRNATarget
XM_015755249.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|=|*||||||||||||||||||
targets:806   AACGUAUAUAUGAAUGUGGGCAAU   829

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347372 (LOC4347372), mRNA uncharacterized LOC4347372(LOC4347372) coding protein psRNATarget
XM_015779139.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||=||||||*|||||||||||
targets:988   AACAUUUAUAUGUAUGUGGGCAAU   1011

2.5 PREDICTED: Oryza sativa Japonica Group fasciclin-like arabinogalactan protein 7 (LOC4336128), mRNA fasciclin-like arabinogalactan protein 7(LOC4336128) coding protein psRNATarget
AK110545.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||=||||||*|||||||||||
targets:994   AACAUUUAUAUGUAUGUGGGCAAU   1017

2.5 Oryza sativa Japonica Group cDNA clone:002-168-B08, full insert sequence NA coding protein psRNATarget
CT836259.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*=||||||||||||*||||||||
targets:1014   AAUAUCUAUAUGAAUAUGGGCAAU   1037

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115E20, full insert sequence NA coding protein psRNATarget
AK070336.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*=|||||*|||||||||||||||
targets:1538   AAUAUCUAAAUGAAUGUGGGCAAU   1561

1.0 Oryza sativa Japonica Group cDNA clone:J023047B14, full insert sequence NA coding protein psRNATarget
XM_015778632.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*=|||||*|||||||||||||||
targets:2562   AAUAUCUAAAUGAAUGUGGGCAAU   2585

1.0 PREDICTED: Oryza sativa Japonica Group glycerophosphodiester phosphodiesterase GDPDL3 (LOC4336129), mRNA glycerophosphodiester phosphodiesterase GDPDL3(LOC4336129) coding protein psRNATarget
CT831361.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||=|||||||||||||*||||
targets:2032   AACAUUUAUAUGAAUGUGGACAAU   2055

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI207J06, full insert sequence NA coding protein psRNATarget
AK072999.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*=|||||||||*|||||||||||
targets:1605   AAUAUCUAUAUGUAUGUGGGCAAU   1628

1.5 Oryza sativa Japonica Group cDNA clone:J023149N01, full insert sequence NA coding protein psRNATarget
AK099807.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*=|*|||||||||||||||||||
targets:3076   AAUAACUAUAUGAAUGUGGGCAAU   3099

0.0 Oryza sativa Japonica Group cDNA clone:J013098H04, full insert sequence NA coding protein psRNATarget
AK067363.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*||||||||||||||=|||
targets:1035   AACAUAUAUAUGAAUGUGGGUAAU   1058

2.5 Oryza sativa Japonica Group cDNA clone:J013100G02, full insert sequence NA coding protein psRNATarget
AK071927.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  *|*|||||||||||||||*|||||
targets:2341   UGAAUCUAUAUGAAUGUGAGCAAU   2364

1.5 Oryza sativa Japonica Group cDNA clone:J013069M04, full insert sequence NA coding protein psRNATarget
XM_015788932.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  *|||||*|||||||||||||*|||
targets:2947   UGCAUCAAUAUGAAUGUGGGAAAU   2970

2.5 PREDICTED: Oryza sativa Japonica Group kanadaptin (LOC4340752), mRNA kanadaptin(LOC4340752) coding protein psRNATarget
CT831392.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:484   AACAUCAAUAUGAAUGUGGGAAAU   507

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN035F20, full insert sequence NA coding protein psRNATarget
AK242637.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:669   AACAUCAAUAUGAAUGUGGGAAAU   692

2.5 Oryza sativa Japonica Group cDNA, clone: J090023H18, full insert sequence NA coding protein psRNATarget
CT834624.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1154   AACAUCAAUAUGAAUGUGGGAAAU   1177

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA040F18, full insert sequence NA coding protein psRNATarget
AK069402.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1240   AACAUCAAUAUGAAUGUGGGAAAU   1263

2.5 Oryza sativa Japonica Group cDNA clone:J023011C17, full insert sequence NA coding protein psRNATarget
AK288502.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:646   AACAUCAAUAUGAAUGUGGGAAAU   669

2.5 Oryza sativa Japonica Group cDNA, clone: J090041D12, full insert sequence NA coding protein psRNATarget
AK110888.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1251   AACAUCAAUAUGAAUGUGGGAAAU   1274

2.5 Oryza sativa Japonica Group cDNA clone:002-172-H04, full insert sequence NA coding protein psRNATarget
AK109562.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*|||||||||||||*||||
targets:791   AACAUAUAUAUGAAUGUGGACAAU   814

2.5 Oryza sativa Japonica Group cDNA clone:002-128-B06, full insert sequence NA coding protein psRNATarget
XM_015785393.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1599   AACAUCAAUAUGAAUGUGGGAAAU   1622

2.5 PREDICTED: Oryza sativa Japonica Group phosphoglycerate mutase-like protein AT74H (LOC4339877), mRNA phosphoglycerate mutase-like protein AT74H(LOC4339877) coding protein psRNATarget
XM_015760082.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1566   AACAUCAAUAUGAAUGUGGGAAAU   1589

2.5 PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC4350193), mRNA putative protease Do-like 14(LOC4350193) coding protein psRNATarget
CT831791.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1832   AACAUCAAUAUGAAUGUGGGAAAU   1855

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI241K23, full insert sequence NA coding protein psRNATarget
AK072272.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1899   AACAUCAAUAUGAAUGUGGGAAAU   1922

2.5 Oryza sativa Japonica Group cDNA clone:J023004C21, full insert sequence NA coding protein psRNATarget
AK099681.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1836   AACAUCAAUAUGAAUGUGGGAAAU   1859

2.5 Oryza sativa Japonica Group cDNA clone:J013071F22, full insert sequence NA coding protein psRNATarget
XM_015795234.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1827   AACAUCAAUAUGAAUGUGGGAAAU   1850

2.5 PREDICTED: Oryza sativa Japonica Group glycoprotein 3-alpha-L-fucosyltransferase A (LOC4345809), mRNA glycoprotein 3-alpha-L-fucosyltransferase A(LOC4345809) coding protein psRNATarget
XM_015759228.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:2159   AACAUCAAUAUGAAUGUGGGAAAU   2182

2.5 PREDICTED: Oryza sativa Japonica Group MLO-like protein 9 (LOC4349258), mRNA MLO-like protein 9(LOC4349258) coding protein psRNATarget
AK318560.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:1161   AACAUCAAUAUGAAUGUGGGAAAU   1184

2.5 Oryza sativa Japonica Group cDNA, clone: J075170N13, full insert sequence NA coding protein psRNATarget
AK072906.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:2793   AACAUCAAUAUGAAUGUGGGAAAU   2816

2.5 Oryza sativa Japonica Group cDNA clone:J023147K18, full insert sequence NA coding protein psRNATarget
AK288796.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||*||||||*||||||||||||
targets:853   AACACCUAUAUAAAUGUGGGCAAU   876

1.5 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
AK072517.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||||*|||||||||*|||||
targets:1395   AACAUCUAAAUGAAUGUGAGCAAU   1418

2.5 Oryza sativa Japonica Group cDNA clone:J023133J02, full insert sequence NA coding protein psRNATarget
XM_015767218.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*|||||||||||||*||||
targets:3771   AACAUAUAUAUGAAUGUGGACAAU   3794

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X7, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767215.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*|||||||||||||*||||
targets:3867   AACAUAUAUAUGAAUGUGGACAAU   3890

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X4, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767217.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*|||||||||||||*||||
targets:3926   AACAUAUAUAUGAAUGUGGACAAU   3949

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X6, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767212.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*|||||||||||||*||||
targets:3993   AACAUAUAUAUGAAUGUGGACAAU   4016

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X2, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767214.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*|||||||||||||*||||
targets:4022   AACAUAUAUAUGAAUGUGGACAAU   4045

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X3, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015767211.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|||*|||||||||||||*||||
targets:4089   AACAUAUAUAUGAAUGUGGACAAU   4112

2.5 PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X1, mRNA putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106) coding protein psRNATarget
XM_015783728.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:2872   AACAUCAAUAUGAAUGUGGGAAAU   2895

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271594 (LOC9271594), transcript variant X1, mRNA uncharacterized LOC9271594(LOC9271594) coding protein psRNATarget
AK289039.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:113   AACAUCAAUAUGAAUGUGGGAAAU   136

2.5 Oryza sativa Japonica Group cDNA, clone: J090091N23, full insert sequence NA coding protein psRNATarget
XM_015778291.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*||||*|||||||||||||*|||
targets:107   AACAUCAAUAUGAAUGUGGGAAAU   130

2.5 PREDICTED: Oryza sativa Japonica Group protein LURP-one-related 6 (LOC4335964), mRNA protein LURP-one-related 6(LOC4335964) coding protein psRNATarget
AK288854.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  =*||||*|||||||||||||*|||
targets:268   GACAUCAAUAUGAAUGUGGGAAAU   291

2.5 Oryza sativa Japonica Group cDNA, clone: J090075O17, full insert sequence NA coding protein psRNATarget
XM_015778179.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  =*||||*|||||||||||||*|||
targets:1700   GACAUCAAUAUGAAUGUGGGAAAU   1723

2.5 PREDICTED: Oryza sativa Japonica Group methylthioribose kinase 2 (LOC107276080), mRNA methylthioribose kinase 2(LOC107276080) coding protein psRNATarget
CT833788.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*=|||*|||||||||||||*|||
targets:425   AAUAUCAAUAUGAAUGUGGGAAAU   448

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA058L20, full insert sequence NA coding protein psRNATarget
CT833789.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*=|||*|||||||||||||*|||
targets:424   AAUAUCAAUAUGAAUGUGGGAAAU   447

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN032F14, full insert sequence NA coding protein psRNATarget
AK070352.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*=|||*|||||||||||||*|||
targets:490   AAUAUCAAUAUGAAUGUGGGAAAU   513

2.5 Oryza sativa Japonica Group cDNA clone:J023051F10, full insert sequence NA coding protein psRNATarget
XM_015755177.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  |*|=|*||||||||||||||||*|
targets:1822   AACGUAUAUAUGAAUGUGGGCAUU   1845

2.5 PREDICTED: Oryza sativa Japonica Group glutathione S-transferase T3 (LOC4346703), transcript variant X1, mRNA glutathione S-transferase T3(LOC4346703) coding protein psRNATarget
XM_015783507.1
ncRNA:24   UCGUAGAUAUACUUACACCCGUUA   1
  **=|||*|||||||||||||*|||
targets:837   UAUAUCAAUAUGAAUGUGGGAAAU   860

2.5 PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor ERF014-like (LOC107277887), mRNA ethylene-responsive transcription factor ERF014-like(LOC107277887) coding protein psRNATarget
© 2017 OPP-ncRBASE. All rights reserved.