Search result

BaseInfo

ncRNA ID novel_osa_miR3345
Species Oryza sativa
Class miRNA
Genome position Chr2:24773592-24773665 [-]
Reference genome IRGSP-1.0
Source SRR2040388
Length 24
Mature sequence(if miRNA) 51 - ACGUGACAUAUCUUAGAACUACGA - 74
Stem-loop(if miRNA) --AC   A          A       AUCUA    UG
    GUG CAUAUCUUAG ACUACGA     GACA  U
    ||| |||||||||| |||||||     ||||
    CAC GUAUAGGAUC UGAUGCU     CUGU  C
UCUA   C          A       AAAAC    UU
Stem-loop sequence ACGUGACAUAUCUUAGAACUACGAAUCUAGACAUGUCUUUGUCCAAAAUCGUAGUACUAGGAUAUGCCACAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288995.1
ncRNA:24   AGCAUCAAGAUUCUAUACAGUGCA   1
  |=|||||*|||*||||||||||||
targets:532   UUGUAGUACUAUGAUAUGUCACGU   555

2.5 Oryza sativa Japonica Group cDNA, clone: J090088A20, full insert sequence NA coding protein psRNATarget