ncRNA ID | novel_osa_miR3345 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:24773592-24773665 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040388 |
Length | 24 |
Mature sequence(if miRNA) | 51 - ACGUGACAUAUCUUAGAACUACGA - 74 |
Stem-loop(if miRNA) |
--AC   A          A       AUCUA    UG     GUG CAUAUCUUAG ACUACGA     GACA  U     ||| |||||||||| |||||||     ||||     CAC GUAUAGGAUC UGAUGCU     CUGU  C UCUA   C          A       AAAAC    UU |
Stem-loop sequence | ACGUGACAUAUCUUAGAACUACGAAUCUAGACAUGUCUUUGUCCAAAAUCGUAGUACUAGGAUAUGCCACAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288995.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090088A20, full insert sequence | NA | coding protein | psRNATarget |