ncRNA ID | novel_osa_miR3343 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:31436489-31436602 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040388;SRR2857731;SRR1738237 |
Length | 24 |
Mature sequence(if miRNA) | 91 - ACAUCAUCUUGCUGAUUGGACCAU - 114 |
Stem-loop(if miRNA) |
--A     UC                    -----C   U   A     UAA     GCU    CAUCA  UUGCUGAUUGGACCAUUGAU      AGA AUG GGAGG   AUUUA   C    |||||  ||||||||||||||||||||      ||| ||| |||||   |||||    GUAGU  AACGACUAAUCUGGUGACUA      UCU UAC CUUCC   UAAAU   A GAC     GA                    ACUCAU   C   C     -UC     GCC |
Stem-loop sequence | ACAUCAUCUUGCUGAUUGGACCAUUGAUCAGAUAUGAGGAGGUAAAUUUAGCUCACCGUAAAUCUCCUUCCCAUCUCUUACUCAAUCAGUGGUCUAAUCAGCAAAGUGAUGCAG |