ncRNA ID | novel_osa_miR3340 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:23770017-23770073 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040388 |
Length | 24 |
Mature sequence(if miRNA) | 34 - CUAGAUCCAUUGGCAUCAAUAUGA - 57 |
Stem-loop(if miRNA) |
--        A      A        AG   AUAUUGAU CUAAUG AUCUAGAU  A   |||||||| |||||| ||||||||  U   UAUAACUA GGUUAC UAGAUCUG  A AG        C      C        AU |
Stem-loop sequence | AUAUUGAUACUAAUGAAUCUAGAUAGAUAUAGUCUAGAUCCAUUGGCAUCAAUAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK120368.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013070H20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK120368.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013070H20, full insert sequence | NA | coding protein | psRNATarget |