| ncRNA ID | novel_osa_miR3335 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:6698762-6698935 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR2040388 |
| Length | 24 |
| Mature sequence(if miRNA) | 151 - AUUUCCGUGUCAACGUUUAACUGU - 174 |
| Stem-loop(if miRNA) |
--A C -C A UUUU UU UAUUUUCAUUGUU -U AA AU U UUUC GUGU AACGUUUAACUGUCCGUCUUAU UGAAAA UUAUAA AG GUUAAA GAUAA CAUG UAA A |||| |||| |||||||||||||||||||||| |||||| |||||| || |||||| ||||| |||| ||| AAAG CAUA UUGCAAAUUGGCAGGCAGAAUA AUUUUU AAUAUU UU UAAUUU CUAUU GUGC AUU C ACA A AA A --UU UU ------------U UU CA GU U |
| Stem-loop sequence | AUUUCCGUGUCAACGUUUAACUGUCCGUCUUAUAUGAAAAUUUUUUAUAAUUAGUAUUUUCAUUGUUGUUAAAUGAUAAAACAUGAUUAAUACUUUAUGCGUGACUUAUCUUUUUAAUUUUUUUUAUAAUUUUUUUAAAUAAGACGGACGGUUAAACGUUAAAUACAGAAAACA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK287584.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J065044J10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015771325.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group protein synthesis inhibitor I (LOC4324068), mRNA | protein synthesis inhibitor I(LOC4324068) | coding protein | psRNATarget |