ncRNA ID | novel_osa_miR3303 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:17684210-17684318 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040387 |
Length | 22 |
Mature sequence(if miRNA) | 88 - UAGGUUUUAAUAUUAUAGGACG - 109 |
Stem-loop(if miRNA) |
-U   -         U      G       C           UA    A     A   UCC AUAAUAUUA AACCUA GACUGGA GGGAUGUUUCA  UAGU CAAUG A   ||| ||||||||| |||||| ||||||| |||||||||||  |||| ||||| U   AGG UAUUAUAAU UUGGAU CUGACCU CUCUGCAAAGU  AUCA GUUAC C GC   A         U      A       A           --    C     U |
Stem-loop sequence | UUCCAUAAUAUUAUAACCUAGGACUGGACGGGAUGUUUCAUAUAGUACAAUGAAUCUCAUUGCACUAUGAAACGUCUCAUCCAGUCAUAGGUUUUAAUAUUAUAGGACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015789263.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At1g73710-like (LOC107276837), mRNA | pentatricopeptide repeat-containing protein At1g73710-like(LOC107276837) | coding protein | psRNATarget |