A ncRNA database for oil producing plants

Search result

BaseInfo

ncRNA ID	novel_osa_miR3284
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:7497714-7497833 [+]
Reference genome	IRGSP-1.0
Source	SRR2040387
Length	24
Mature sequence(if miRNA)	97 - AGAAAGUCUUAUAACCUGAAAUGG - 120
Stem-loop(if miRNA)	-- UA A AC GUUUCA UUAUAAGACUUU UAGUAUUGCCCACAUUCAUAUAUGUGUUAAUGAAU C \|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| UAAAGU AAUAUUCUGAAA AUCGUAACGGGUGUAAGUAUAUACACAAUUACUUA U GG CC G GA
Stem-loop sequence	GUUUCAUAUUAUAAGACUUUAUAGUAUUGCCCACAUUCAUAUAUGUGUUAAUGAAUACCUAGAUUCAUUAACACAUAUAUGAAUGUGGGCAAUGCUAGAAAGUCUUAUAACCUGAAAUGG

Targets Info

Target Acc

Alignment

Exception

Target Description

Target Gene Name

Target Type

Method

AK287948.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:842	CUAUUUCAGGUUAUAAGACUUUCU	865

0.0

Oryza sativa Japonica Group cDNA, clone: J075028D01, full insert sequence

coding protein

psRNATarget

XM_015795948.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:992	CUAUUUCAGGUUAUAAGACUUUCU	1015

0.0

PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L18a-like protein (LOC4326318), mRNA

60S ribosomal protein L18a-like protein(LOC4326318)

coding protein

psRNATarget

XM_015777008.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1360	CCGUUUCAGGUUAUAAGACUUUCU	1383

0.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331744 (LOC4331744), mRNA

uncharacterized LOC4331744(LOC4331744)

coding protein

psRNATarget

AK073998.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1496	CCGUUUCAGGUUAUAAGACUUUCU	1519

0.0

Oryza sativa Japonica Group cDNA clone:J033071H21, full insert sequence

coding protein

psRNATarget

CT834348.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1393	CCGUUUCAGGUUAUAAGACUUUCU	1416

0.0

Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106J11, full insert sequence

coding protein

psRNATarget

AK068435.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1562	CCGUUUCAGGUUAUAAGACUUUCU	1585

0.0

Oryza sativa Japonica Group cDNA clone:J013155N15, full insert sequence

coding protein

psRNATarget

XM_015774404.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:3132	CCGUUUCAGGUUAUAAGACUUUCU	3155

0.0

PREDICTED: Oryza sativa Japonica Group protein argonaute 11-like (LOC4333733), mRNA

protein argonaute 11-like(LOC4333733)

coding protein

psRNATarget

AK120530.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1834	CCGUUUCAGGUUAUAAGACUUUCU	1857

0.0

Oryza sativa Japonica Group cDNA clone:J013127H10, full insert sequence

coding protein

psRNATarget

XM_015755177.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1736	CCGUUUCAGGUUAUAAGACUUUCU	1759

0.0

PREDICTED: Oryza sativa Japonica Group glutathione S-transferase T3 (LOC4346703), transcript variant X1, mRNA

glutathione S-transferase T3(LOC4346703)

coding protein

psRNATarget

CT837804.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|=\|
targets:855	CUAUUUCAGGUUAUAAGACUUUUU	878

1.5

Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115N24, full insert sequence

coding protein

psRNATarget

XM_015781390.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:730	CUGUUUCAGGUUAUAAGACUUUCU	753

0.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336685 (LOC4336685), transcript variant X2, mRNA

uncharacterized LOC4336685(LOC4336685)

coding protein

psRNATarget

XM_015781389.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:730	CUGUUUCAGGUUAUAAGACUUUCU	753

0.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336685 (LOC4336685), transcript variant X1, mRNA

uncharacterized LOC4336685(LOC4336685)

coding protein

psRNATarget

AK060129.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:875	CCGUUCCAGGUUAUAAGACUUUCU	898

1.0

Oryza sativa Japonica Group cDNA clone:006-309-A10, full insert sequence

coding protein

psRNATarget

XM_015757964.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:918	CCGUUCCAGGUUAUAAGACUUUCU	941

1.0

PREDICTED: Oryza sativa Japonica Group protein YLS9 (LOC4349292), transcript variant X1, mRNA

protein YLS9(LOC4349292)

coding protein

psRNATarget

AK071625.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1290	CCGUUUCAUGUUAUAAGACUUUCU	1313

1.0

Oryza sativa Japonica Group cDNA clone:J023106F16, full insert sequence

coding protein

psRNATarget

AK288568.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|*\|\|\|\|\|\|\|
targets:1367	CCGUUUCAGGUUAUAAAACUUUCU	1390

1.5

Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence

coding protein

psRNATarget

XM_015765286.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1475	CCGUUUUAAGUUAUAAGACUUUCU	1498

2.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4352593 (LOC4352593), transcript variant X7, mRNA

uncharacterized LOC4352593(LOC4352593)

coding protein

psRNATarget

XM_015765289.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1479	CCGUUUUAAGUUAUAAGACUUUCU	1502

2.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4352593 (LOC4352593), transcript variant X10, mRNA

uncharacterized LOC4352593(LOC4352593)

coding protein

psRNATarget

XM_015765288.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1485	CCGUUUUAAGUUAUAAGACUUUCU	1508

2.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4352593 (LOC4352593), transcript variant X9, mRNA

uncharacterized LOC4352593(LOC4352593)

coding protein

psRNATarget

AK067363.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|=\|
targets:949	CCGUUUCAGAUUAUAAGACUUUUU	972

2.5

Oryza sativa Japonica Group cDNA clone:J013100G02, full insert sequence

coding protein

psRNATarget

XM_015767218.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:3683	CUGUUUCAAGUUAUAAGACUUUCU	3706

1.0

PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X7, mRNA

putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106)

coding protein

psRNATarget

XM_015767215.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:3779	CUGUUUCAAGUUAUAAGACUUUCU	3802

1.0

PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X4, mRNA

putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106)

coding protein

psRNATarget

XM_015767217.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:3838	CUGUUUCAAGUUAUAAGACUUUCU	3861

1.0

PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X6, mRNA

putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106)

coding protein

psRNATarget

XM_015767212.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:3905	CUGUUUCAAGUUAUAAGACUUUCU	3928

1.0

PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X2, mRNA

putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106)

coding protein

psRNATarget

XM_015767214.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:3934	CUGUUUCAAGUUAUAAGACUUUCU	3957

1.0

PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X3, mRNA

putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106)

coding protein

psRNATarget

XM_015767211.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:4001	CUGUUUCAAGUUAUAAGACUUUCU	4024

1.0

PREDICTED: Oryza sativa Japonica Group putative pentatricopeptide repeat-containing protein At5g43820 (LOC4329106), transcript variant X1, mRNA

putative pentatricopeptide repeat-containing protein At5g43820(LOC4329106)

coding protein

psRNATarget

AK288786.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2829	GCGUUUCAGGUGAUAAGACUUUCU	2852

1.5

Oryza sativa Japonica Group cDNA, clone: J090069L01, full insert sequence

coding protein

psRNATarget

AK061392.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|\|\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1140	CCAUUUCAUAUUAUAAGACUUUCU	1163

2.0

Oryza sativa Japonica Group cDNA clone:006-305-D03, full insert sequence

coding protein

psRNATarget

AK071758.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:795	CCGUUUCAUAUUAUAAGACUUUCU	818

2.0

Oryza sativa Japonica Group cDNA clone:J023112J01, full insert sequence

coding protein

psRNATarget

XM_015792379.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:807	CCGUUUCAUAUUAUAAGACUUUCU	830

2.0

PREDICTED: Oryza sativa Japonica Group uncharacterized protein At4g14100 (LOC4342613), mRNA

uncharacterized protein At4g14100(LOC4342613)

coding protein

psRNATarget

XM_015758512.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1426	CCGUUUCAUUUUAUAAGACUUUCU	1449

2.0

PREDICTED: Oryza sativa Japonica Group BTB/POZ and MATH domain-containing protein 1-like (LOC107279175), mRNA

BTB/POZ and MATH domain-containing protein 1-like(LOC107279175)

coding protein

psRNATarget

XM_015768357.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1530	CCGUUUCAUAUUAUAAGACUUUCU	1553

2.0

PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X6, mRNA

protein SRG1(LOC4329022)

coding protein

psRNATarget

XM_015768354.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1566	CCGUUUCAUAUUAUAAGACUUUCU	1589

2.0

PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X3, mRNA

protein SRG1(LOC4329022)

coding protein

psRNATarget

XM_015768355.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1580	CCGUUUCAUAUUAUAAGACUUUCU	1603

2.0

PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X4, mRNA

protein SRG1(LOC4329022)

coding protein

psRNATarget

AK065581.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1586	CCGUUUCAUAUUAUAAGACUUUCU	1609

2.0

Oryza sativa Japonica Group cDNA clone:J013034J09, full insert sequence

coding protein

psRNATarget

CT832958.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:816	CCGUUUCAUAUUAUAAGACUUUCU	839

2.0

Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F21, full insert sequence

coding protein

psRNATarget

XM_015768356.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1614	CCGUUUCAUAUUAUAAGACUUUCU	1637

2.0

PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X5, mRNA

protein SRG1(LOC4329022)

coding protein

psRNATarget

XM_015768352.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1624	CCGUUUCAUAUUAUAAGACUUUCU	1647

2.0

PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X1, mRNA

protein SRG1(LOC4329022)

coding protein

psRNATarget

XM_015768353.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1636	CCGUUUCAUAUUAUAAGACUUUCU	1659

2.0

PREDICTED: Oryza sativa Japonica Group protein SRG1 (LOC4329022), transcript variant X2, mRNA

protein SRG1(LOC4329022)

coding protein

psRNATarget

AK065332.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:819	CCGUUUCAUAUUAUAAGACUUUCU	842

2.0

Oryza sativa Japonica Group cDNA clone:J013000K10, full insert sequence

coding protein

psRNATarget

XM_015764678.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1588	CCGUUUCAUAUUAUAAGACUUUCU	1611

2.0

PREDICTED: Oryza sativa Japonica Group mannan endo-1,4-beta-mannosidase 8 (LOC9271116), mRNA

mannan endo-1,4-beta-mannosidase 8(LOC9271116)

coding protein

psRNATarget

AF044260.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2036	CCGUUUCAUAUUAUAAGACUUUCU	2059

2.0

Oryza sativa (japonica cultivar-group) clone OsRLK8 receptor serine/threonine kinase mRNA, complete cds

coding protein

psRNATarget

AK064411.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1921	CCGUUUCAUAUUAUAAGACUUUCU	1944

2.0

Oryza sativa Japonica Group cDNA clone:002-110-A07, full insert sequence

coding protein

psRNATarget

XM_015755493.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2161	CCGUUUCAUAUUAUAAGACUUUCU	2184

2.0

PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At5g39030 (LOC4326124), mRNA

probable receptor-like protein kinase At5g39030(LOC4326124)

coding protein

psRNATarget

AK073522.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2472	CCGUUUCAUAUUAUAAGACUUUCU	2495

2.0

Oryza sativa Japonica Group cDNA clone:J033046G09, full insert sequence

coding protein

psRNATarget

XM_015757225.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2272	CCGUUUCAGUUUAUAAAACUUUCU	2295

2.5

PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At1g08610 (LOC4348896), mRNA

pentatricopeptide repeat-containing protein At1g08610(LOC4348896)

coding protein

psRNATarget

AK103437.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2344	CCGUUUCAGUUUAUAAAACUUUCU	2367

2.5

Oryza sativa Japonica Group cDNA clone:J033129C05, full insert sequence

coding protein

psRNATarget

XM_015787709.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:517	CCGUUUCAUAUUAUAAGACUUUCU	540

2.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X1, mRNA

uncharacterized LOC4340081(Os06g0142000)

coding protein

psRNATarget

AK288796.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:748	CCGUUUCAUAUUAUAAGACUUUCU	771

2.0

Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence

coding protein

psRNATarget

XM_015787712.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:517	CCGUUUCAUAUUAUAAGACUUUCU	540

2.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X4, mRNA

uncharacterized LOC4340081(Os06g0142000)

coding protein

psRNATarget

XM_015762769.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:3772	CCGUUUCAUAUUAUAAGACUUUCU	3795

2.0

PREDICTED: Oryza sativa Japonica Group protein STABILIZED1 (LOC9270118), mRNA

protein STABILIZED1(LOC9270118)

coding protein

psRNATarget

AK101040.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:3841	CCGUUUCAUAUUAUAAGACUUUCU	3864

2.0

Oryza sativa Japonica Group cDNA clone:J033000O03, full insert sequence

coding protein

psRNATarget

XM_015763234.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|=\|\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:6268	CUAUUUCAUAUUAUAAGACUUUCU	6291

2.0

PREDICTED: Oryza sativa Japonica Group F-box protein At5g25290 (LOC4326973), transcript variant X1, mRNA

F-box protein At5g25290(LOC4326973)

coding protein

psRNATarget

CT835594.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:369	CCGUUUUAUAUUAUAAGACUUUCU	392

3.0

Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN021O24, full insert sequence

coding protein

psRNATarget

XM_015790894.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	=\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:538	UCGUUUCAGAUUAUAACACUUUCU	561

2.5

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276821 (LOC107276821), mRNA

uncharacterized LOC107276821(LOC107276821)

coding protein

psRNATarget

CT836499.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|==\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:459	CUGUUUCAUAUUAUAAGACUUUCU	482

2.0

Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA014C07, full insert sequence

coding protein

psRNATarget

XM_015765335.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1181	CCGUUUUAUAUUAUAAGACUUUCU	1204

3.0

PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X2, mRNA

light-inducible protein CPRF2-like(LOC107276775)

coding protein

psRNATarget

CT837661.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1181	CCGUUUUAUAUUAUAAGACUUUCU	1204

3.0

Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063K17, full insert sequence

coding protein

psRNATarget

XM_015765333.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2080	CCGUUUUAUAUUAUAAGACUUUCU	2103

3.0

PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X1, mRNA

light-inducible protein CPRF2-like(LOC107276775)

coding protein

psRNATarget

XM_015765337.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2695	CCGUUUUAUAUUAUAAGACUUUCU	2718

3.0

PREDICTED: Oryza sativa Japonica Group light-inducible protein CPRF2-like (LOC107276775), transcript variant X5, mRNA

light-inducible protein CPRF2-like(LOC107276775)

coding protein

psRNATarget

AK099807.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	=\|=\|\|\|\|\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2990	UCGUUUCAUAUUAUAAGACUUUCU	3013

2.0

Oryza sativa Japonica Group cDNA clone:J013098H04, full insert sequence

coding protein

psRNATarget

AK288429.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|=\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2499	CCGUUUUAUAUUAUAAGACUUUCU	2522

3.0

Oryza sativa Japonica Group cDNA, clone: J090033C09, full insert sequence

coding protein

psRNATarget

XM_015755249.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:749	CCUUUUCAUAUUAUAAGACUUUCU	772

2.0

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347372 (LOC4347372), mRNA

uncharacterized LOC4347372(LOC4347372)

coding protein

psRNATarget

XM_015766541.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	=\|=\|\|\|=\|**\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:2384	UCGUUUUAUAUUAUAAGACUUUCU	2407

3.0

PREDICTED: Oryza sativa Japonica Group multicopper oxidase LPR1 (LOC4326011), transcript variant X1, mRNA

multicopper oxidase LPR1(LOC4326011)

coding protein

psRNATarget

AK104174.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:647	AUGUUUCAUAUUAUAAGACUUUCU	670

2.0

Oryza sativa Japonica Group cDNA clone:006-301-C05, full insert sequence

coding protein

psRNATarget

AK067462.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:648	AUGUUUCAUAUUAUAAGACUUUCU	671

2.0

Oryza sativa Japonica Group cDNA clone:J013102C12, full insert sequence

coding protein

psRNATarget

AK071843.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:782	AUGUUUCAUAUUAUAAGACUUUCU	805

2.0

Oryza sativa Japonica Group cDNA clone:J023117M08, full insert sequence

coding protein

psRNATarget

XM_015772707.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	==\|\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:973	AUGUUUCAUAUUAUAAGACUUUCU	996

2.0

PREDICTED: Oryza sativa Japonica Group protein ELF4-LIKE 3 (LOC4333090), mRNA

protein ELF4-LIKE 3(LOC4333090)

coding protein

psRNATarget

XM_015787637.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|--\|\|=\|\|\|\|\|\|\|\|\|*\|\|\|\|\|\|\|
targets:460	CC--UUUAGGUUAUAAAACUUUCU	481

2.5

PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278318 (LOC107278318), transcript variant X1, mRNA

uncharacterized LOC107278318(LOC107278318)

coding protein

psRNATarget

XM_015769902.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|=\|\|\|\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1150	CCGUAUCAUAUUAUAAGACUUUCU	1173

2.0

PREDICTED: Oryza sativa Japonica Group putative methyltransferase DDB_G0268948 (LOC107278642), mRNA

putative methyltransferase DDB_G0268948(LOC107278642)

coding protein

psRNATarget

AK065487.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	\|\|--\|\|=\|\|\|\|\|\|\|\|\|*\|\|\|\|\|\|\|
targets:2192	CC--UUUAGGUUAUAAAACUUUCU	2213

2.5

Oryza sativa Japonica Group cDNA clone:J013003I22, full insert sequence

coding protein

psRNATarget

AK242012.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:698	AGGUUUCAUAUUAUAAGACUUUCU	721

2.0

Oryza sativa Japonica Group cDNA, clone: J075106H22, full insert sequence

coding protein

psRNATarget

CT834453.1

ncRNA:24	GGUAAAGUCCAAUAUUCUGAAAGA	1
	==\|\|\|=\|*\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:778	AUGUUUUAUAUUAUAAGACUUUCU	801

3.0

Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115M14, full insert sequence

coding protein

psRNATarget