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BaseInfo

ncRNA ID novel_osa_miR3280
Species Oryza sativa
Class miRNA
Genome position Chr11:10921072-10921183 [+]
Reference genome IRGSP-1.0
Source SRR1555747;SRR1555749;SRR2097778;SRR2099567;SRR2099568;SRR1556016;SRR1556020
Length 24
Mature sequence(if miRNA) 1 - AAGACUUUCUAGCAUUACUCAUAU - 24
Stem-loop(if miRNA) --   A        C   AC                             G   CAC
  AAG CUUUCUAG AUU  UCAUAUUUAUAUAGAUGUUAAUGAAUCUA ACA   A
  ||| |||||||| |||  ||||||||||||||||||||||||||||| |||
  UUC GAAAGAUC UAA  GGUAUAAGUAUAUCUACAAUUAUUUAGAU UGU   U
CA   A        A   CA                             A   AUA
Stem-loop sequence AAGACUUUCUAGCAUUACUCAUAUUUAUAUAGAUGUUAAUGAAUCUAGACACACAUAUAUGUAUAGAUUUAUUAACAUCUAUAUGAAUAUGGACAAUACUAGAAAGACUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK104174.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=||||||||||||||||||
targets:748   AUGUGGGUAAUGCUAGAAAGUCUU   771

1.0 Oryza sativa Japonica Group cDNA clone:006-301-C05, full insert sequence NA coding protein psRNATarget
AK067462.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=||||||||||||||||||
targets:749   AUGUGGGUAAUGCUAGAAAGUCUU   772

1.0 Oryza sativa Japonica Group cDNA clone:J013102C12, full insert sequence NA coding protein psRNATarget
AK071843.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=||||||||||||||||||
targets:883   AUGUGGGUAAUGCUAGAAAGUCUU   906

1.0 Oryza sativa Japonica Group cDNA clone:J023117M08, full insert sequence NA coding protein psRNATarget
CT834453.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=||||||||||||||||||
targets:881   AUGUGGGUAAUGCUAGAAAGUCUU   904

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115M14, full insert sequence NA coding protein psRNATarget
XM_015772707.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=||||||||||||||||||
targets:1074   AUGUGGGUAAUGCUAGAAAGUCUU   1097

1.0 PREDICTED: Oryza sativa Japonica Group protein ELF4-LIKE 3 (LOC4333090), mRNA protein ELF4-LIKE 3(LOC4333090) coding protein psRNATarget
XM_015755199.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*||||||||||||||||
targets:1160   AUAUGAGCAAUGCUAGAAAGUCUU   1183

1.0 PREDICTED: Oryza sativa Japonica Group cinnamoyl-CoA reductase 1 (LOC9270429), transcript variant X1, mRNA cinnamoyl-CoA reductase 1(LOC9270429) coding protein psRNATarget
XM_015755201.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*||||||||||||||||
targets:1163   AUAUGAGCAAUGCUAGAAAGUCUU   1186

1.0 PREDICTED: Oryza sativa Japonica Group cinnamoyl-CoA reductase 1 (LOC9270429), transcript variant X2, mRNA cinnamoyl-CoA reductase 1(LOC9270429) coding protein psRNATarget
AK067363.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=||||||=|||||||||||
targets:1048   AUGUGGGUAAUGUUAGAAAGUCUU   1071

2.5 Oryza sativa Japonica Group cDNA clone:J013100G02, full insert sequence NA coding protein psRNATarget
XM_015790768.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||=|*||||||||||||||||
targets:2   AUAUGGGCAAUGCUAGAAAGUCUU   25

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9268710 (LOC9268710), transcript variant X2, mRNA uncharacterized LOC9268710(LOC9268710) coding protein psRNATarget
XM_015790767.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||=|*||||||||||||||||
targets:2   AUAUGGGCAAUGCUAGAAAGUCUU   25

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9268710 (LOC9268710), transcript variant X1, mRNA uncharacterized LOC9268710(LOC9268710) coding protein psRNATarget
CT836330.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||=|*||||||||||||||||
targets:906   AUAUGGGCAAUGCUAGAAAGUCUU   929

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN072K19, full insert sequence NA coding protein psRNATarget
AK241537.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||=|*||||||||||||||||
targets:908   AUAUGGGCAAUGCUAGAAAGUCUU   931

2.0 Oryza sativa Japonica Group cDNA, clone: J065173J04, full insert sequence NA coding protein psRNATarget
XM_015794357.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||=|*||||||||||||||||
targets:1400   AUAUGGGCAAUGCUAGAAAGUCUU   1423

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327949 (LOC4327949), mRNA uncharacterized LOC4327949(LOC4327949) coding protein psRNATarget
AK070816.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=|*|||||||||||||||||||
targets:1357   AUGUAAGUAAUGCUAGAAAGUCUU   1380

0.0 Oryza sativa Japonica Group cDNA clone:J023066M01, full insert sequence NA coding protein psRNATarget
AK072517.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||||*||||||||||||||||
targets:1408   AUGUGAGCAAUGCUAGAAAGUCUU   1431

1.0 Oryza sativa Japonica Group cDNA clone:J023133J02, full insert sequence NA coding protein psRNATarget
AK288429.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||=|*||||||||||||||||
targets:2556   AUAUGGGCAAUGCUAGAAAGUCUU   2579

2.0 Oryza sativa Japonica Group cDNA, clone: J090033C09, full insert sequence NA coding protein psRNATarget
AK288568.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||=*|||||||||||||||||
targets:1467   AUAUGGAUAAUGCUAGAAAGUCUU   1490

2.0 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
AK287948.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:940   AUGUGGGCAAUGCUAGAAAGUCUU   963

2.0 Oryza sativa Japonica Group cDNA, clone: J075028D01, full insert sequence NA coding protein psRNATarget
XM_015755249.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:819   AUGUGGGCAAUGCUAGAAAGUCUU   842

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347372 (LOC4347372), mRNA uncharacterized LOC4347372(LOC4347372) coding protein psRNATarget
AK060129.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|||||||||*||||||||
targets:945   AUGUGGGUAAUGCUAAAAAGUCUU   968

2.5 Oryza sativa Japonica Group cDNA clone:006-309-A10, full insert sequence NA coding protein psRNATarget
XM_015795948.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:1090   AUGUGGGCAAUGCUAGAAAGUCUU   1113

2.0 PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L18a-like protein (LOC4326318), mRNA 60S ribosomal protein L18a-like protein(LOC4326318) coding protein psRNATarget
XM_015757964.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|||||||||*||||||||
targets:988   AUGUGGGUAAUGCUAAAAAGUCUU   1011

2.5 PREDICTED: Oryza sativa Japonica Group protein YLS9 (LOC4349292), transcript variant X1, mRNA protein YLS9(LOC4349292) coding protein psRNATarget
AK070336.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:1551   AUGUGGGCAAUGCUAGAAAGUCUU   1574

2.0 Oryza sativa Japonica Group cDNA clone:J023047B14, full insert sequence NA coding protein psRNATarget
CT832958.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=*|||||||||||||||||
targets:930   AUGUGGAUAAUGCUAGAAAGUCUU   953

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F21, full insert sequence NA coding protein psRNATarget
AK065332.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=*|||||||||||||||||
targets:933   AUGUGGAUAAUGCUAGAAAGUCUU   956

2.0 Oryza sativa Japonica Group cDNA clone:J013000K10, full insert sequence NA coding protein psRNATarget
AK107207.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:535   AUGUGGGCAAUGCUAGAAAGUCUU   558

2.0 Oryza sativa Japonica Group cDNA clone:002-125-B10, full insert sequence NA coding protein psRNATarget
XM_015760503.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||||*|||||||||||||=||
targets:2475   AUGUGAGCAAUGCUAGAAAGUUUU   2498

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277162 (LOC107277162), transcript variant X1, mRNA uncharacterized LOC107277162(LOC107277162) coding protein psRNATarget
XM_015778632.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:2575   AUGUGGGCAAUGCUAGAAAGUCUU   2598

2.0 PREDICTED: Oryza sativa Japonica Group glycerophosphodiester phosphodiesterase GDPDL3 (LOC4336129), mRNA glycerophosphodiester phosphodiesterase GDPDL3(LOC4336129) coding protein psRNATarget
XM_015766247.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:2580   AUGUGGGCAAUGCUAGAAAGUCUU   2603

2.0 PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107277300), mRNA putative receptor protein kinase ZmPK1(LOC107277300) coding protein psRNATarget
AK288472.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=|*=||||||||||||||||||
targets:1500   AUGUAGGUAAUGCUAGAAAGUCUU   1523

1.0 Oryza sativa Japonica Group cDNA, clone: J090037K20, full insert sequence NA coding protein psRNATarget
AK120530.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:1891   AUGUGGGCAAUGCUAGAAAGUCUU   1914

2.0 Oryza sativa Japonica Group cDNA clone:J013127H10, full insert sequence NA coding protein psRNATarget
XM_015787709.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=*|||||||||||||||||
targets:617   AUGUGGAUAAUGCUAGAAAGUCUU   640

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X1, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
XM_015787712.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=*|||||||||||||||||
targets:617   AUGUGGAUAAUGCUAGAAAGUCUU   640

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X4, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
AK288932.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=*|||||||||||||||||
targets:3057   AUGUGGAUAAUGCUAGAAAGUCUU   3080

2.0 Oryza sativa Japonica Group cDNA, clone: J090082H22, full insert sequence NA coding protein psRNATarget
XM_015769168.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||||||||||||||||
targets:2758   AUGUGGGCAAUGCUAGAAAGUCUU   2781

2.0 PREDICTED: Oryza sativa Japonica Group probable splicing factor 3A subunit 1 (LOC4328860), transcript variant X3, mRNA probable splicing factor 3A subunit 1(LOC4328860) coding protein psRNATarget
JB165024.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||||||||*|||||||||||*
targets:88   AUGUGAGUAAUACUAGAAAGUCUA   111

2.5 Sequence 2688 from Patent EP2559767 NA coding protein psRNATarget
LQ236693.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||||||||*|||||||||||*
targets:88   AUGUGAGUAAUACUAGAAAGUCUA   111

2.5 Sequence 2688 from Patent EP2985353 NA coding protein psRNATarget
HI404563.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||||||||*|||||||||||*
targets:88   AUGUGAGUAAUACUAGAAAGUCUA   111

2.5 Sequence 2688 from Patent EP2074227 NA coding protein psRNATarget
XM_015758483.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*||||||||||||*|||
targets:1093   AUAUGAGCAAUGCUAGAAAGACUU   1116

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277697 (LOC107277697), transcript variant X1, mRNA uncharacterized LOC107277697(LOC107277697) coding protein psRNATarget
CT833624.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||||*||*||||||||||||||||
targets:1125   AUAUAAGCAAUGCUAGAAAGUCUU   1148

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN046D04, full insert sequence NA coding protein psRNATarget
XM_015766555.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:2500   AUAUGAGCAAUGCUAGAAAAUCUU   2523

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X9, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766554.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:2590   AUAUGAGCAAUGCUAGAAAAUCUU   2613

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X8, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766553.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:2794   AUAUGAGCAAUGCUAGAAAAUCUU   2817

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X7, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766553.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||*|||||||||||||
targets:613   AUGUGGGCAACGCUAGAAAGUCUU   636

3.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X7, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766552.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:3984   AUAUGAGCAAUGCUAGAAAAUCUU   4007

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X6, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766552.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||*|||||||||||||
targets:1803   AUGUGGGCAACGCUAGAAAGUCUU   1826

3.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X6, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766549.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:4598   AUAUGAGCAAUGCUAGAAAAUCUU   4621

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X3, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766549.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||*|||||||||||||
targets:2417   AUGUGGGCAACGCUAGAAAGUCUU   2440

3.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X3, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766548.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:4760   AUAUGAGCAAUGCUAGAAAAUCUU   4783

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X2, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766551.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:4797   AUAUGAGCAAUGCUAGAAAAUCUU   4820

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X5, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766551.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||*|||||||||||||
targets:2783   AUGUGGGCAACGCUAGAAAGUCUU   2806

3.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X5, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766550.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:4882   AUAUGAGCAAUGCUAGAAAAUCUU   4905

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X4, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766550.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||*|||||||||||||
targets:2783   AUGUGGGCAACGCUAGAAAGUCUU   2806

3.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X4, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766546.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||||*|||||||||||*||||
targets:4964   AUAUGAGCAAUGCUAGAAAAUCUU   4987

2.5 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X1, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015766546.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=|*||*|||||||||||||
targets:2783   AUGUGGGCAACGCUAGAAAGUCUU   2806

3.0 PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase IRK (LOC4327614), transcript variant X1, mRNA probable LRR receptor-like serine/threonine-protein kinase IRK(LOC4327614) coding protein psRNATarget
XM_015764736.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||*|*||||||||||||||||
targets:851   AUGUGCGCAAUGCUAGAAAGUCUU   874

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278197 (LOC107278197), transcript variant X2, mRNA uncharacterized LOC107278197(LOC107278197) coding protein psRNATarget
AK059715.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=|||**||||||||||||||||
targets:116   AUGUGAAGAAUGCUAGAAAGUCUU   139

2.0 Oryza sativa Japonica Group cDNA clone:001-032-F10, full insert sequence NA coding protein psRNATarget
XM_015764735.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||*|*||||||||||||||||
targets:1141   AUGUGCGCAAUGCUAGAAAGUCUU   1164

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278197 (LOC107278197), transcript variant X1, mRNA uncharacterized LOC107278197(LOC107278197) coding protein psRNATarget
AK071927.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||||*|||||||||||*||||
targets:2354   AUGUGAGCAAUGCUAGAAAAUCUU   2377

2.5 Oryza sativa Japonica Group cDNA clone:J013069M04, full insert sequence NA coding protein psRNATarget
AK288617.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  |||||=**||||||||||||||||
targets:1191   AUAUGGACAAUGCUAGAAAGUCUU   1214

3.0 Oryza sativa Japonica Group cDNA, clone: J090054B15, full insert sequence NA coding protein psRNATarget
XM_015795868.1
ncRNA:24   UAUACUCAUUACGAUCUUUCAGAA   1
  ||=||=**||||||||||||||||
targets:1246   AUGUGGACAAUGCUAGAAAGUCUU   1269

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277671 (LOC107277671), mRNA uncharacterized LOC107277671(LOC107277671) coding protein psRNATarget
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