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BaseInfo

ncRNA ID	novel_osa_miR3279
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:6848945-6848997 [-]
Reference genome	IRGSP-1.0
Source	SRR2040387
Length	24
Mature sequence(if miRNA)	30 - GUGGCACCAACCGGGACUAAAGAU - 53
Stem-loop(if miRNA)	--   GC                 AU   GUG  ACCAACCGGGACUAAAG  C   |||  |||||||||||||||||  U   CAU  UGGUUGGCCCUGAUUUC  U AC   GA                 AA
Stem-loop sequence	GUGGCACCAACCGGGACUAAAGAUCUUAACUUUAGUCCCGGUUGGUAGUACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288463.1	ncRNA:24   UAGAAAUCAGGGCCAACCACGGUG   1   ||||||||||||||||||||=||| targets:556   AUCUUUAGUCCCGGUUGGUGUCAC   579 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:24   UAGAAAUCAGGGCCAACCACGGUG   1   ||||||||*||||||||||||=|| targets:44   AUCUUUAGCCCCGGUUGGUGCUAC   67 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
JB164979.1	ncRNA:24   UAGAAAUCAGGGCCAACCACGGUG   1   ||||||||*||||||||||||=|| targets:44   AUCUUUAGCCCCGGUUGGUGCUAC   67 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
HI404518.1	ncRNA:24   UAGAAAUCAGGGCCAACCACGGUG   1   ||||||||*||||||||||||=|| targets:44   AUCUUUAGCCCCGGUUGGUGCUAC   67 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget