ncRNA ID | novel_osa_miR3274 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:20989815-20989953 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040387 |
Length | 25 |
Mature sequence(if miRNA) | 115 - AGGUUAAACGUUGAACACAGAAACU - 139 |
Stem-loop(if miRNA) |
----UUUUUU              AUCC          -AUUU       ----U    AUUUUUUAUUGUUU           UUCAACGUUUGACC    GUCUUAUUUG     UUUAUGA     UAGU              G           ||||||||||||||    ||||||||||     |||||||     ||||           AAGUUGCAAAUUGG    CAGAAUAAAC     GAAUGCU     AAUU              U UCAAAGACAC              AAAA          CUUUU       UUUUU    UUUUUAAUUCAGUG |
Stem-loop sequence | UUUUUUUUCAACGUUUGACCAUCCGUCUUAUUUGAUUUUUUAUGAUUAGUAUUUUUUAUUGUUUGUGUGACUUAAUUUUUUUAAUUUUUUCGUAAGUUUUCCAAAUAAGACAAAAGGUUAAACGUUGAACACAGAAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK107240.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:002-125-F04, full insert sequence | NA | coding protein | psRNATarget |