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BaseInfo

ncRNA ID novel_osa_miR3274
Species Oryza sativa
Class miRNA
Genome position Chr4:20989815-20989953 [+]
Reference genome IRGSP-1.0
Source SRR2040387
Length 25
Mature sequence(if miRNA) 115 - AGGUUAAACGUUGAACACAGAAACU - 139
Stem-loop(if miRNA) ----UUUUUU              AUCC          -AUUU       ----U    AUUUUUUAUUGUUU
          UUCAACGUUUGACC    GUCUUAUUUG     UUUAUGA     UAGU              G
          ||||||||||||||    ||||||||||     |||||||     ||||
          AAGUUGCAAAUUGG    CAGAAUAAAC     GAAUGCU     AAUU              U
UCAAAGACAC              AAAA          CUUUU       UUUUU    UUUUUAAUUCAGUG
Stem-loop sequence UUUUUUUUCAACGUUUGACCAUCCGUCUUAUUUGAUUUUUUAUGAUUAGUAUUUUUUAUUGUUUGUGUGACUUAAUUUUUUUAAUUUUUUCGUAAGUUUUCCAAAUAAGACAAAAGGUUAAACGUUGAACACAGAAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107240.1
ncRNA:25   UCAAAGACACAAGUUGCAAAUUGGA   1
  |||||||||||||||||||||||||
targets:1745   AGUUUCUGUGUUCAACGUUUAACCU   1769

0.0 Oryza sativa Japonica Group cDNA clone:002-125-F04, full insert sequence NA coding protein psRNATarget