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BaseInfo

ncRNA ID novel_osa_miR3267
Species Oryza sativa
Class miRNA
Genome position Chr2:12276199-12276337 [-]
Reference genome IRGSP-1.0
Source SRR2040387;SRR2040400
Length 24
Mature sequence(if miRNA) 116 - AAUUACGGCCCGUCACUGAUAGGU - 139
Stem-loop(if miRNA) --AAUUAC          UG    GUG     C    C     CC     G                UGG
        GGCCCGUCAC  AUAG   UUAUC GUGA GGGCU  AAUUU AGGCCCGAUUGAGAUA   A
        ||||||||||  ||||   ||||| |||| |||||  ||||| ||||||||||||||||
        UUGGGCAGUG  UAUU   GAUAG CACU CCCGG  UUAAA UCCGGGCUAACUCUAU   A
UUUUGAGU          CG    GUG     U    A     CA     -                UGU
Stem-loop sequence AAUUACGGCCCGUCACUGAUAGGUGUUAUCCGUGACGGGCUCCAAUUUGAGGCCCGAUUGAGAUAUGGAAUGUUAUCUCAAUCGGGCCUAAAUUACGGCCCAUCACUGAUAGGUGUUAUGCGUGACGGGUUUGAGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK119390.1
ncRNA:24   UGGAUAGUCACUGCCCGGCAUUAA   1
  |||||||||||||||||||||=||
targets:2977   ACCUAUCAGUGACGGGCCGUAGUU   3000

1.5 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget