ncRNA ID | novel_osa_miR3267 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:12276199-12276337 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040387;SRR2040400 |
Length | 24 |
Mature sequence(if miRNA) | 116 - AAUUACGGCCCGUCACUGAUAGGU - 139 |
Stem-loop(if miRNA) |
--AAUUAC          UG    GUG     C    C     CC     G                UGG         GGCCCGUCAC  AUAG   UUAUC GUGA GGGCU  AAUUU AGGCCCGAUUGAGAUA   A         ||||||||||  ||||   ||||| |||| |||||  ||||| ||||||||||||||||         UUGGGCAGUG  UAUU   GAUAG CACU CCCGG  UUAAA UCCGGGCUAACUCUAU   A UUUUGAGU          CG    GUG     U    A     CA     -                UGU |
Stem-loop sequence | AAUUACGGCCCGUCACUGAUAGGUGUUAUCCGUGACGGGCUCCAAUUUGAGGCCCGAUUGAGAUAUGGAAUGUUAUCUCAAUCGGGCCUAAAUUACGGCCCAUCACUGAUAGGUGUUAUGCGUGACGGGUUUGAGUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK119390.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence | NA | coding protein | psRNATarget |