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BaseInfo

ncRNA ID	novel_osa_miR3262
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:1037117-1037188 [+]
Reference genome	IRGSP-1.0
Source	SRR2040387
Length	24
Mature sequence(if miRNA)	1 - AUUCCCUCCGUCUCAAAAAAGGCA - 24
Stem-loop(if miRNA)	--            U         C   CCCU   UAU   AUUCCCUCCGUC CAAAAAAGG AAA    GAC   G   |||||||||||| ||||||||| |||    |||   U   UGAGGGAGGCAG GUUUUUUUU UUU    CUG   A UA            U         -   ----   UCU
Stem-loop sequence	AUUCCCUCCGUCUCAAAAAAGGCAAACCCUGACUAUGUAUCUGUCUUUUUUUUUUUGUGACGGAGGGAGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015769736.1	ncRNA:24   ACGGAAAAAACUCUGCCUCCCUUA   1   |||||||||||||||||||||||| targets:1885   UGCCUUUUUUGAGACGGAGGGAAU   1908 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At2g17670 (LOC4328106), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At2g17670(LOC4328106)	coding protein	psRNATarget
XM_015769737.1	ncRNA:24   ACGGAAAAAACUCUGCCUCCCUUA   1   |||||||||||||||||||||||| targets:1973   UGCCUUUUUUGAGACGGAGGGAAU   1996 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At2g17670 (LOC4328106), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At2g17670(LOC4328106)	coding protein	psRNATarget
XM_015769735.1	ncRNA:24   ACGGAAAAAACUCUGCCUCCCUUA   1   |||||||||||||||||||||||| targets:1983   UGCCUUUUUUGAGACGGAGGGAAU   2006 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At2g17670 (LOC4328106), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At2g17670(LOC4328106)	coding protein	psRNATarget
AK068691.1	ncRNA:24   ACGGAAAAAACUCUGCCUCCCUUA   1   **=*||||||||||||||||||=| targets:499   AUUAUUUUUUGAGACGGAGGGAGU   522 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013162E13, full insert sequence	NA	coding protein	psRNATarget
AK288602.1	ncRNA:24   ACGGAAAAAACUCUGCCUCCCUUA   1   *|==||||||*|||||||||||=| targets:849   AGUUUUUUUUUAGACGGAGGGAGU   872 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090052H23, full insert sequence	NA	coding protein	psRNATarget