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BaseInfo

ncRNA ID novel_osa_miR3261
Species Oryza sativa
Class miRNA
Genome position Chr1:4342319-4342398 [-]
Reference genome IRGSP-1.0
Source SRR2040387;SRR2857733
Length 20
Mature sequence(if miRNA) 61 - UUAAUGAAUCUAGACACACU - 80
Stem-loop(if miRNA) --                   UAUACAUUUAUA     GUU
  UUAAUGAAUCUAGACACAC            UAGAU   A
  |||||||||||||||||||            |||||
  AAUUAUUUAGAUCUGUGUG            AUCUA   A
AC                   --UGAUACACAG     AGU
Stem-loop sequence UUAAUGAAUCUAGACACACUAUACAUUUAUAUAGAUGUUAAUGAAUCUAGACACAUAGUGUGUGUCUAGAUUUAUUAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015785143.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||
targets:1771   UGUGUGUCUAGAUUCAUUAA   1790

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266451 (LOC9266451), mRNA uncharacterized LOC9266451(LOC9266451) coding protein psRNATarget
AK106777.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||
targets:1343   UGUGUGUCUAGAUUCAUUAA   1362

0.0 Oryza sativa Japonica Group cDNA clone:002-115-G12, full insert sequence NA coding protein psRNATarget
AK070816.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *||||||||||||||||||=
targets:1326   UGUGUGUCUAGAUUCAUUAG   1345

1.0 Oryza sativa Japonica Group cDNA clone:J023066M01, full insert sequence NA coding protein psRNATarget
AK072372.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *||||||=||||||||||||
targets:706   UGUGUGUUUAGAUUCAUUAA   725

1.5 Oryza sativa Japonica Group cDNA clone:J023068F06, full insert sequence NA coding protein psRNATarget
AK120847.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *||||||=||||||||||||
targets:551   UGUGUGUUUAGAUUCAUUAA   570

1.5 Oryza sativa Japonica Group cDNA clone:J023023A10, full insert sequence NA coding protein psRNATarget
XM_015755201.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **||||||||||||||||||
targets:1132   UAUGUGUCUAGAUUCAUUAA   1151

1.0 PREDICTED: Oryza sativa Japonica Group cinnamoyl-CoA reductase 1 (LOC9270429), transcript variant X2, mRNA cinnamoyl-CoA reductase 1(LOC9270429) coding protein psRNATarget
XM_015755199.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **||||||||||||||||||
targets:1129   UAUGUGUCUAGAUUCAUUAA   1148

1.0 PREDICTED: Oryza sativa Japonica Group cinnamoyl-CoA reductase 1 (LOC9270429), transcript variant X1, mRNA cinnamoyl-CoA reductase 1(LOC9270429) coding protein psRNATarget
XM_015778351.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **||||||||||||||||||
targets:691   UAUGUGUCUAGAUUCAUUAA   710

1.0 PREDICTED: Oryza sativa Japonica Group UPF0426 protein At1g28150, chloroplastic (LOC4336466), transcript variant X3, mRNA UPF0426 protein At1g28150, chloroplastic(LOC4336466) coding protein psRNATarget
AK065957.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **||||||||||||||||||
targets:633   UAUGUGUCUAGAUUCAUUAA   652

1.0 Oryza sativa Japonica Group cDNA clone:J013044D08, full insert sequence NA coding protein psRNATarget
AK119344.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|||||=||||||||||||
targets:1218   UAUGUGUUUAGAUUCAUUAA   1237

2.5 Oryza sativa Japonica Group cDNA clone:001-131-E01, full insert sequence NA coding protein psRNATarget
AK072999.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|||||=||||||||||||
targets:1587   UAUGUGUUUAGAUUCAUUAA   1606

2.5 Oryza sativa Japonica Group cDNA clone:J023149N01, full insert sequence NA coding protein psRNATarget
AK288284.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|||||=||||||||||||
targets:28   UAUGUGUUUAGAUUCAUUAA   47

2.5 Oryza sativa Japonica Group cDNA, clone: J090018D15, full insert sequence NA coding protein psRNATarget
XM_015795868.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|||||=||||||||||||
targets:1215   UAUGUGUUUAGAUUCAUUAA   1234

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277671 (LOC107277671), mRNA uncharacterized LOC107277671(LOC107277671) coding protein psRNATarget
AK120148.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||*|||||||||||||
targets:517   UGUGUGCCUAGAUUCAUUAA   536

1.0 Oryza sativa Japonica Group cDNA clone:J013029J05, full insert sequence NA coding protein psRNATarget
XM_015769902.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||||||*|||||||||
targets:1219   UGUGUGUCUAUAUUCAUUAA   1238

1.5 PREDICTED: Oryza sativa Japonica Group putative methyltransferase DDB_G0268948 (LOC107278642), mRNA putative methyltransferase DDB_G0268948(LOC107278642) coding protein psRNATarget
AK109562.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||*|||||||||||||
targets:773   UGUGUGCCUAGAUUCAUUAA   792

1.0 Oryza sativa Japonica Group cDNA clone:002-128-B06, full insert sequence NA coding protein psRNATarget
XM_015769449.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *||*||||||||||||||||
targets:137   UGUAUGUCUAGAUUCAUUAA   156

1.0 PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor ERF018-like (LOC107278604), mRNA ethylene-responsive transcription factor ERF018-like(LOC107278604) coding protein psRNATarget
XM_015772707.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||*|||||||||||||
targets:1043   UGUGUGCCUAGAUUCAUUAA   1062

1.0 PREDICTED: Oryza sativa Japonica Group protein ELF4-LIKE 3 (LOC4333090), mRNA protein ELF4-LIKE 3(LOC4333090) coding protein psRNATarget
AK071843.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||*|||||||||||||
targets:852   UGUGUGCCUAGAUUCAUUAA   871

1.0 Oryza sativa Japonica Group cDNA clone:J023117M08, full insert sequence NA coding protein psRNATarget
AK067462.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||*|||||||||||||
targets:718   UGUGUGCCUAGAUUCAUUAA   737

1.0 Oryza sativa Japonica Group cDNA clone:J013102C12, full insert sequence NA coding protein psRNATarget
AK104174.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||*|||||||||||||
targets:717   UGUGUGCCUAGAUUCAUUAA   736

1.0 Oryza sativa Japonica Group cDNA clone:006-301-C05, full insert sequence NA coding protein psRNATarget
HI404563.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *||||||*|||||||||||=
targets:57   UGUGUGUAUAGAUUCAUUAG   76

2.5 Sequence 2688 from Patent EP2074227 NA coding protein psRNATarget
JB165024.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *||||||*|||||||||||=
targets:57   UGUGUGUAUAGAUUCAUUAG   76

2.5 Sequence 2688 from Patent EP2559767 NA coding protein psRNATarget
LQ236693.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *||||||*|||||||||||=
targets:57   UGUGUGUAUAGAUUCAUUAG   76

2.5 Sequence 2688 from Patent EP2985353 NA coding protein psRNATarget
XM_015786593.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  |*|*||||||||||||||||
targets:981   ACUCUGUCUAGAUUCAUUAA   1000

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340983 (LOC4340983), mRNA uncharacterized LOC4340983(LOC4340983) coding protein psRNATarget
AK071746.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  |*|*||||||||||||||||
targets:883   ACUCUGUCUAGAUUCAUUAA   902

2.0 Oryza sativa Japonica Group cDNA clone:J023111G24, full insert sequence NA coding protein psRNATarget
XM_015794898.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  |*|||*||||||||||||||
targets:556   AAUGUAUCUAGAUUCAUUAA   575

2.0 PREDICTED: Oryza sativa Japonica Group putative EG45-like domain containing protein 1 (LOC9267730), mRNA putative EG45-like domain containing protein 1(LOC9267730) coding protein psRNATarget
AK242586.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  |*|||*||||||||||||||
targets:545   AAUGUAUCUAGAUUCAUUAA   564

2.0 Oryza sativa Japonica Group cDNA, clone: J090010P05, full insert sequence NA coding protein psRNATarget
XM_015789040.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:4810   UAUAUGUCUAGAUUCAUUAA   4829

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266525 (LOC9266525), transcript variant X1, mRNA uncharacterized LOC9266525(LOC9266525) coding protein psRNATarget
XM_015791317.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:4492   UAUAUGUCUAGAUUCAUUAA   4511

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342778 (LOC4342778), transcript variant X1, mRNA uncharacterized LOC4342778(Os07g0231700) coding protein psRNATarget
AK120243.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||||*||||||||||*
targets:6309   CGUGUGUCCAGAUUCAUUAU   6328

2.5 Oryza sativa Japonica Group cDNA clone:J013044H03, full insert sequence NA coding protein psRNATarget
AK121342.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:4644   UAUAUGUCUAGAUUCAUUAA   4663

2.0 Oryza sativa Japonica Group cDNA clone:J023121A11, full insert sequence NA coding protein psRNATarget
AK288568.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1436   UAUAUGUCUAGAUUCAUUAA   1455

2.0 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
AK288568.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:2835   UAUAUGUCUAGAUUCAUUAG   2854

3.0 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
XM_015780916.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:4792   UAUAUGUCUAGAUUCAUUAA   4811

2.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X1, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780918.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:4783   UAUAUGUCUAGAUUCAUUAA   4802

2.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X3, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780917.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:4734   UAUAUGUCUAGAUUCAUUAA   4753

2.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X2, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015764779.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:4451   UAUAUGUCUAGAUUCAUUAA   4470

2.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X4, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
AK099933.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:407   CAUAUGUCUAGAUUCAUUAA   426

2.0 Oryza sativa Japonica Group cDNA clone:J013119E02, full insert sequence NA coding protein psRNATarget
AK067512.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:2328   UAUAUGUCUAGAUUCAUUAA   2347

2.0 Oryza sativa Japonica Group cDNA clone:J013109G08, full insert sequence NA coding protein psRNATarget
AK288214.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:2664   UAUAUGUCUAGAUUCAUUAA   2683

2.0 Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence NA coding protein psRNATarget
XM_015764777.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:3617   UAUAUGUCUAGAUUCAUUAA   3636

2.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X2, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
AK072517.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1377   CAUAUGUCUAGAUUCAUUAA   1396

2.0 Oryza sativa Japonica Group cDNA clone:J023133J02, full insert sequence NA coding protein psRNATarget
XM_015787712.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:586   UAUAUGUCUAGAUUCAUUAA   605

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X4, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
XM_015755177.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1804   UAUAUGUCUAGAUUCAUUAA   1823

2.0 PREDICTED: Oryza sativa Japonica Group glutathione S-transferase T3 (LOC4346703), transcript variant X1, mRNA glutathione S-transferase T3(LOC4346703) coding protein psRNATarget
AK070890.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:962   UAUAUGUCUAGAUUCAUUAA   981

2.0 Oryza sativa Japonica Group cDNA clone:J023069D18, full insert sequence NA coding protein psRNATarget
AK288796.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:835   UAUAUGUCUAGAUUCAUUAA   854

2.0 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
XM_015787709.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:586   UAUAUGUCUAGAUUCAUUAA   605

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X1, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
XM_015764776.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:3381   UAUAUGUCUAGAUUCAUUAA   3400

2.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X1, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
XM_015764778.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:3376   UAUAUGUCUAGAUUCAUUAA   3395

2.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X3, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
AK288872.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1830   UAUAUGUCUAGAUUCAUUAA   1849

2.0 Oryza sativa Japonica Group cDNA, clone: J090078I05, full insert sequence NA coding protein psRNATarget
AK288472.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1469   UAUAUGUCUAGAUUCAUUAA   1488

2.0 Oryza sativa Japonica Group cDNA, clone: J090037K20, full insert sequence NA coding protein psRNATarget
XM_015778632.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:2544   CAUAUGUCUAGAUUCAUUAA   2563

2.0 PREDICTED: Oryza sativa Japonica Group glycerophosphodiester phosphodiesterase GDPDL3 (LOC4336129), mRNA glycerophosphodiester phosphodiesterase GDPDL3(LOC4336129) coding protein psRNATarget
XM_015759228.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:2141   UAUAUGUCUAGAUUCAUUAA   2160

2.0 PREDICTED: Oryza sativa Japonica Group MLO-like protein 9 (LOC4349258), mRNA MLO-like protein 9(LOC4349258) coding protein psRNATarget
AK072272.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1881   UAUAUGUCUAGAUUCAUUAA   1900

2.0 Oryza sativa Japonica Group cDNA clone:J023004C21, full insert sequence NA coding protein psRNATarget
XM_015758929.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||||*||||||||||*
targets:1688   CGUGUGUCCAGAUUCAUUAU   1707

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4348034 (LOC4348034), transcript variant X3, mRNA uncharacterized LOC4348034(Os10g0130500) coding protein psRNATarget
AK121202.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1587   UAUAUGUCUAGAUUCAUUAA   1606

2.0 Oryza sativa Japonica Group cDNA clone:J023087K24, full insert sequence NA coding protein psRNATarget
XM_015764593.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1587   UAUAUGUCUAGAUUCAUUAA   1606

2.0 PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 91C1 (LOC4352520), mRNA UDP-glycosyltransferase 91C1(LOC4352520) coding protein psRNATarget
AK060965.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1587   UAUAUGUCUAGAUUCAUUAA   1606

2.0 Oryza sativa Japonica Group cDNA clone:006-202-B11, full insert sequence NA coding protein psRNATarget
XM_015777008.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1420   UAUAUGUCUAGAUUCAUUAA   1439

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331744 (LOC4331744), mRNA uncharacterized LOC4331744(LOC4331744) coding protein psRNATarget
AK070336.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1520   CAUAUGUCUAGAUUCAUUAA   1539

2.0 Oryza sativa Japonica Group cDNA clone:J023047B14, full insert sequence NA coding protein psRNATarget
CT833624.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1094   UAUAUGUCUAGAUUCAUUAA   1113

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN046D04, full insert sequence NA coding protein psRNATarget
XM_015758930.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||||*||||||||||*
targets:1139   CGUGUGUCCAGAUUCAUUAU   1158

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4348034 (LOC4348034), transcript variant X4, mRNA uncharacterized LOC4348034(Os10g0130500) coding protein psRNATarget
AK069402.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1222   UAUAUGUCUAGAUUCAUUAA   1241

2.0 Oryza sativa Japonica Group cDNA clone:J023011C17, full insert sequence NA coding protein psRNATarget
CT837490.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:891   UAUAUGUCUAGAUUCAUUAA   910

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F07, full insert sequence NA coding protein psRNATarget
XM_015795948.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:1059   UAUAUGUCUAGAUUCAUUAA   1078

2.0 PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L18a-like protein (LOC4326318), mRNA 60S ribosomal protein L18a-like protein(LOC4326318) coding protein psRNATarget
CT837804.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:922   UAUAUGUCUAGAUUCAUUAA   941

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115N24, full insert sequence NA coding protein psRNATarget
AK287948.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:909   UAUAUGUCUAGAUUCAUUAA   928

2.0 Oryza sativa Japonica Group cDNA, clone: J075028D01, full insert sequence NA coding protein psRNATarget
CT831392.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:466   CAUAUGUCUAGAUUCAUUAA   485

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN035F20, full insert sequence NA coding protein psRNATarget
XM_015755953.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|||||*||||||||||||
targets:555   CAUGUGUAUAGAUUCAUUAA   574

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278908 (LOC107278908), mRNA uncharacterized LOC107278908(LOC107278908) coding protein psRNATarget
AK240884.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:472   UAUAUGUCUAGAUUCAUUAA   491

2.0 Oryza sativa Japonica Group cDNA, clone: J065028F04, full insert sequence NA coding protein psRNATarget
XM_015778291.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  ****||||||||||||||||
targets:89   CACAUGUCUAGAUUCAUUAA   108

3.0 PREDICTED: Oryza sativa Japonica Group protein LURP-one-related 6 (LOC4335964), mRNA protein LURP-one-related 6(LOC4335964) coding protein psRNATarget
AK289039.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  ****||||||||||||||||
targets:95   CACAUGUCUAGAUUCAUUAA   114

3.0 Oryza sativa Japonica Group cDNA, clone: J090091N23, full insert sequence NA coding protein psRNATarget
CT835159.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*||||||||||||||||
targets:260   UAUAUGUCUAGAUUCAUUAA   279

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI015J24, full insert sequence NA coding protein psRNATarget
AK065951.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  |***||||||||||||||||
targets:2757   AUAUUGUCUAGAUUCAUUAA   2776

3.0 Oryza sativa Japonica Group cDNA clone:J013045C05, full insert sequence NA coding protein psRNATarget
XM_015779937.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  ****||||||||||||||||
targets:1034   UAGAUGUCUAGAUUCAUUAA   1053

3.0 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X1, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
XM_015779938.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  ****||||||||||||||||
targets:942   UAGAUGUCUAGAUUCAUUAA   961

3.0 PREDICTED: Oryza sativa Japonica Group small nuclear ribonucleoprotein Sm D1 (LOC4336118), transcript variant X2, mRNA small nuclear ribonucleoprotein Sm D1(LOC4336118) coding protein psRNATarget
AK069797.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  ****||||||||||||||||
targets:430   UACAUGUCUAGAUUCAUUAA   449

3.0 Oryza sativa Japonica Group cDNA clone:J023028A18, full insert sequence NA coding protein psRNATarget
XM_015794357.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  |***||||||||||||||||
targets:1369   AUAUUGUCUAGAUUCAUUAA   1388

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327949 (LOC4327949), mRNA uncharacterized LOC4327949(LOC4327949) coding protein psRNATarget
XM_015755249.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  ****||||||||||||||||
targets:788   UUCAUGUCUAGAUUCAUUAA   807

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347372 (LOC4347372), mRNA uncharacterized LOC4347372(LOC4347372) coding protein psRNATarget
XM_015769168.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:2727   UAUAUGUCUAGAUUCAUUAG   2746

3.0 PREDICTED: Oryza sativa Japonica Group probable splicing factor 3A subunit 1 (LOC4328860), transcript variant X3, mRNA probable splicing factor 3A subunit 1(LOC4328860) coding protein psRNATarget
XM_015767450.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1412   UAUAUGUCUAGAUUCAUUAG   1431

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4328324 (LOC4328324), transcript variant X1, mRNA uncharacterized LOC4328324(LOC4328324) coding protein psRNATarget
XM_015767451.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1412   UAUAUGUCUAGAUUCAUUAG   1431

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4328324 (LOC4328324), transcript variant X2, mRNA uncharacterized LOC4328324(LOC4328324) coding protein psRNATarget
AK068770.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1656   UAUAUGUCUAGAUUCAUUAG   1675

3.0 Oryza sativa Japonica Group cDNA clone:J013169P07, full insert sequence NA coding protein psRNATarget
XM_015793334.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1787   UAUAUGUCUAGAUUCAUUAG   1806

3.0 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X1, mRNA transcription factor bHLH112(LOC9271688) coding protein psRNATarget
XM_015793335.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1769   UAUAUGUCUAGAUUCAUUAG   1788

3.0 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X2, mRNA transcription factor bHLH112(LOC9271688) coding protein psRNATarget
XM_015793336.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1616   UAUAUGUCUAGAUUCAUUAG   1635

3.0 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X3, mRNA transcription factor bHLH112(LOC9271688) coding protein psRNATarget
AK069041.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:2201   UAUAUGUCUAGAUUCAUUAG   2220

3.0 Oryza sativa Japonica Group cDNA clone:J023004J15, full insert sequence NA coding protein psRNATarget
XM_015763894.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1946   UAUAUGUCUAGAUUCAUUAG   1965

3.0 PREDICTED: Oryza sativa Japonica Group ureide permease 2 (LOC4352286), mRNA ureide permease 2(LOC4352286) coding protein psRNATarget
AK069916.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1932   UAUAUGUCUAGAUUCAUUAG   1951

3.0 Oryza sativa Japonica Group cDNA clone:J023038C16, full insert sequence NA coding protein psRNATarget
CT832555.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1405   UAUAUGUCUAGAUUCAUUAG   1424

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110J22, full insert sequence NA coding protein psRNATarget
XM_015765624.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1188   UAUAUGUCUAGAUUCAUUAG   1207

3.0 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC4324918), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(LOC4324918) coding protein psRNATarget
AK241345.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:1181   UAUAUGUCUAGAUUCAUUAG   1200

3.0 Oryza sativa Japonica Group cDNA, clone: J065148C06, full insert sequence NA coding protein psRNATarget
CT828736.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:797   UAUAUGUCUAGAUUCAUUAG   816

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA125N05, full insert sequence NA coding protein psRNATarget
AK241705.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  |*|*|||||||||||||||*
targets:4034   AAUAUGUCUAGAUUCAUUAU   4053

3.0 Oryza sativa Japonica Group cDNA, clone: J065196L09, full insert sequence NA coding protein psRNATarget
AK288390.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *||*|*||||||||||||||
targets:717   UGUCUAUCUAGAUUCAUUAA   736

2.0 Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence NA coding protein psRNATarget
BT131987.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|||||||||||||||=
targets:3   UNUAUGUCUAGAUUCAUUAG   22

3.0 Oryza sativa clone RRlibB00014 mRNA sequence NA coding protein psRNATarget
AK099807.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  *|||||*||||||*||||||
targets:3058   UGUGUGCCUAGAUCCAUUAA   3077

2.5 Oryza sativa Japonica Group cDNA clone:J013098H04, full insert sequence NA coding protein psRNATarget
CT837594.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  |*|*|||||||||||||||*
targets:1340   AAUAUGUCUAGAUUCAUUAU   1359

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN021M15, full insert sequence NA coding protein psRNATarget
AK288952.1
ncRNA:20   UCACACAGAUCUAAGUAAUU   1
  **|*|*||||||||||||||
targets:284   UAUCUAUCUAGAUUCAUUAA   303

3.0 Oryza sativa Japonica Group cDNA, clone: J090083K12, full insert sequence NA coding protein psRNATarget
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