ncRNA ID | novel_osa_miR3250 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:22809998-22810080 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040387 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUUCGCAUGUGGUCUUCUUAGGUC - 24 |
Stem-loop(if miRNA) |
--               UCU    UC A       G   AAU   CUUCGCAUGUGGUCU   UAGG  G CCGCAUG GAA   A   |||||||||||||||   ||||  | ||||||| |||   GAAGCGUACGCCAGG   AUUC  C GGUGUAC CUU   U UA               UAU    UU -       G   CUA |
Stem-loop sequence | CUUCGCAUGUGGUCUUCUUAGGUCGACCGCAUGGGAAAAUAUAUCUUCGCAUGUGGCUUCUUAUAUGGACCGCAUGCGAAGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288261.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090015P07, full insert sequence | NA | coding protein | psRNATarget |