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BaseInfo

ncRNA ID	novel_osa_miR3244
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:8599376-8599574 [+]
Reference genome	IRGSP-1.0
Source	SRR1555747;SRR2099428;SRR2099568;SRR4407955;SRR1556020
Length	21
Mature sequence(if miRNA)	1 - UUUGACGCCGUUGACUUUUUG - 21
Stem-loop(if miRNA)	--                        C  U   A                     A   AAGUAAUUAUUAAUUCUUUUCCUAUC       UUAUUGUUAAAUAUAUU   UUUGACGCCGUUGACUUUUUGGCA AU UUU ACCGUUCGUCUUAUUCAAAAA UUU                          AUUUGAU                 U   |||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||                          |||||||   AAACUGUGGUAACUGAAAAAUCGU UA AAA UGGCAAGCAGAAUAAGUUUUU AAA                          AUACAUU                 U AC                        A  C   C                     G   -------------------AUACUUU       UUAAUAUACGGAUGUAU
Stem-loop sequence	UUUGACGCCGUUGACUUUUUGGCACAUUUUUAACCGUUCGUCUUAUUCAAAAAAUUUAAGUAAUUAUUAAUUCUUUUCCUAUCAUUUGAUUUAUUGUUAAAUAUAUUUUUAUGUAGGCAUAUAAUUUUACAUAUUUCAUAAAAGUUUUUGAAUAAGACGAACGGUCAAACAUAUGCUAAAAAGUCAAUGGUGUCAAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK099582.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   ||||||||||||||||||||| targets:1184   CAAAAAGUCAACGGCGUCAAA   1204 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013041M17, full insert sequence	NA	coding protein	psRNATarget
XM_015757652.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||||||||| targets:1532   UAAAAAGUCAACGGCGUCAAA   1552 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group chlorophyllase-2, chloroplastic (LOC4348648), mRNA	chlorophyllase-2, chloroplastic(LOC4348648)	coding protein	psRNATarget
XM_015775808.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||||||||| targets:34   UAAAAAGUCAACGGCGUCAAA   54 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group zinc finger protein 8 (LOC4332064), mRNA	zinc finger protein 8(LOC4332064)	coding protein	psRNATarget
AK066189.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||||||||| targets:697   UAAAAAGUCAACGGCGUCAAA   717 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013052P16, full insert sequence	NA	coding protein	psRNATarget
XM_015790302.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||||||||| targets:71   UAAAAAGUCAACGGCGUCAAA   91 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group flavin-containing monooxygenase FMO GS-OX-like 8 (LOC4342236), mRNA	flavin-containing monooxygenase FMO GS-OX-like 8(LOC4342236)	coding protein	psRNATarget
AK288782.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||||||||| targets:1232   UAAAAAGUCAACGGCGUCAAA   1252 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090069D21, full insert sequence	NA	coding protein	psRNATarget
XM_015790837.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:6   AAAAAAGUCAACGGCGUCAAA   26 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group DNA topoisomerase 1-like (LOC107281695), mRNA	DNA topoisomerase 1-like(LOC107281695)	coding protein	psRNATarget
BT131706.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:16   AAAAAAGUCAACGGCGUCAAA   36 Target Full Sequence	0.0	Oryza sativa clone RRlibD00056 mRNA sequence	NA	coding protein	psRNATarget
CT833961.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:913   AAAAAAGUCAACGGCGUCAAA   933 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA003N03, full insert sequence	NA	coding protein	psRNATarget
CT833962.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:940   AAAAAAGUCAACGGCGUCAAA   960 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110D05, full insert sequence	NA	coding protein	psRNATarget
AK069037.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:948   AAAAAAGUCAACGGCGUCAAA   968 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023004F17, full insert sequence	NA	coding protein	psRNATarget
AK108096.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:766   AAAAAAGUCAACGGCGUCAAA   786 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-139-A08, full insert sequence	NA	coding protein	psRNATarget
AK108096.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*||||*||||||||| targets:1044   AAAAAAAUCAAAGGCGUCAAA   1064 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-139-A08, full insert sequence	NA	coding protein	psRNATarget
XM_015787231.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:770   AAAAAAGUCAACGGCGUCAAA   790 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339918 (LOC4339918), mRNA	uncharacterized LOC4339918(LOC4339918)	coding protein	psRNATarget
XM_015787231.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*||||*||||||||| targets:1050   AAAAAAAUCAAAGGCGUCAAA   1070 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339918 (LOC4339918), mRNA	uncharacterized LOC4339918(LOC4339918)	coding protein	psRNATarget
AK063389.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:409   AAAAAAGUCAACGGCGUCAAA   429 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:001-114-G12, full insert sequence	NA	coding protein	psRNATarget
AK241597.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:978   AAAAAAGUCAACGGCGUCAAA   998 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J065183F01, full insert sequence	NA	coding protein	psRNATarget
AK121363.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:950   AAAAAAGUCAACGGCGUCAAA   970 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023124N01, full insert sequence	NA	coding protein	psRNATarget
XM_015766177.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:985   AAAAAAGUCAACGGCGUCAAA   1005 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group probable glutathione S-transferase (LOC4325763), mRNA	probable glutathione S-transferase(LOC4325763)	coding protein	psRNATarget
AK288290.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:2846   AAAAAAGUCAACGGCGUCAAA   2866 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090019D06, full insert sequence	NA	coding protein	psRNATarget
AK065369.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:1587   AAAAAAGUCAACGGCGUCAAA   1607 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013023A04, full insert sequence	NA	coding protein	psRNATarget
AK288963.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:269   AAAAAAGUCAACGGCGUCAAA   289 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090084H09, full insert sequence	NA	coding protein	psRNATarget
AK288628.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||||||||| targets:2446   AAAAAAGUCAACGGCGUCAAA   2466 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090054O04, full insert sequence	NA	coding protein	psRNATarget
AK288628.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||||||||*| targets:5207   UAAAAAGUCAACGGCGUCAUA   5227 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090054O04, full insert sequence	NA	coding protein	psRNATarget
CT837831.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:317   UAAAAAGUCAACGGUGUCAAA   337 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN069H22, full insert sequence	NA	coding protein	psRNATarget
XM_015757691.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:710   UAAAAAGUCAACGGUGUCAAA   730 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group EMI domain-containing protein 1 (LOC4349449), transcript variant X2, mRNA	EMI domain-containing protein 1(LOC4349449)	coding protein	psRNATarget
XM_015757690.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:714   UAAAAAGUCAACGGUGUCAAA   734 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group EMI domain-containing protein 1 (LOC4349449), transcript variant X1, mRNA	EMI domain-containing protein 1(LOC4349449)	coding protein	psRNATarget
AK067104.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:936   UAAAAAGUCAACGGUGUCAAA   956 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013096C13, full insert sequence	NA	coding protein	psRNATarget
XM_015769093.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:929   UAAAAAGUCAACGGUGUCAAA   949 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4328591 (LOC4328591), mRNA	uncharacterized LOC4328591(LOC4328591)	coding protein	psRNATarget
XM_015781137.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:12   UAAAAAGUCAACGGUGUCAAA   32 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group putative receptor-like protein kinase At4g00960 (LOC4335588), transcript variant X1, mRNA	putative receptor-like protein kinase At4g00960(LOC4335588)	coding protein	psRNATarget
AK243582.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:1202   UAAAAAGUCAACGGUGUCAAA   1222 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J100082N18, full insert sequence	NA	coding protein	psRNATarget
AK073028.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:160   UAAAAAGUCAACGGUGUCAAA   180 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023144H14, full insert sequence	NA	coding protein	psRNATarget
XM_015769926.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:2632   UAAAAAGUCAACGGUGUCAAA   2652 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group metal-nicotianamine transporter YSL2 (LOC4330161), transcript variant X3, mRNA	metal-nicotianamine transporter YSL2(LOC4330161)	coding protein	psRNATarget
XM_015769924.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:2669   UAAAAAGUCAACGGUGUCAAA   2689 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group metal-nicotianamine transporter YSL2 (LOC4330161), transcript variant X1, mRNA	metal-nicotianamine transporter YSL2(LOC4330161)	coding protein	psRNATarget
AK070761.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:1712   UAAAAAGUCAACGGUGUCAAA   1732 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023067D20, full insert sequence	NA	coding protein	psRNATarget
AK287805.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:3427   UAAAAAGUCAACGGUGUCAAA   3447 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065178C08, full insert sequence	NA	coding protein	psRNATarget
AK065848.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:1333   UAAAAAGUCAACGGUGUCAAA   1353 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013041B11, full insert sequence	NA	coding protein	psRNATarget
AK073459.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:1041   UAAAAAGUCAACGGUGUCAAA   1061 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033040L10, full insert sequence	NA	coding protein	psRNATarget
XM_015795807.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:3306   UAAAAAGUCAACGGUGUCAAA   3326 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group mediator of RNA polymerase II transcription subunit 20a (LOC4347187), transcript variant X1, mRNA	mediator of RNA polymerase II transcription subunit 20a(LOC4347187)	coding protein	psRNATarget
AK288852.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||=|||||| targets:4256   UAAAAAGUCAACGGUGUCAAA   4276 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090075M07, full insert sequence	NA	coding protein	psRNATarget
HI404183.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||=||||||||| targets:182   AAAAAAGUCAAUGGCGUCAAA   202 Target Full Sequence	1.5	Sequence 2308 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236313.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||=||||||||| targets:182   AAAAAAGUCAAUGGCGUCAAA   202 Target Full Sequence	1.5	Sequence 2308 from Patent EP2985353	NA	coding protein	psRNATarget
JB164644.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||=||||||||| targets:182   AAAAAAGUCAAUGGCGUCAAA   202 Target Full Sequence	1.5	Sequence 2308 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236621.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||=||||||||| targets:211   AAAAAAGUCAAUGGCGUCAAA   231 Target Full Sequence	1.5	Sequence 2616 from Patent EP2985353	NA	coding protein	psRNATarget
JB164952.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||=||||||||| targets:211   AAAAAAGUCAAUGGCGUCAAA   231 Target Full Sequence	1.5	Sequence 2616 from Patent EP2559767	NA	coding protein	psRNATarget
HI404491.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||=||||||||| targets:211   AAAAAAGUCAAUGGCGUCAAA   231 Target Full Sequence	1.5	Sequence 2616 from Patent EP2074227	NA	coding protein	psRNATarget
CT829822.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||=||| targets:622   AAAAAAGUCAACGGCGUUAAA   642 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111B24, full insert sequence	NA	coding protein	psRNATarget
AK288960.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||||=|||||| targets:396   AAAAAAGUCAACGGUGUCAAA   416 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090084F05, full insert sequence	NA	coding protein	psRNATarget
AK287459.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||=||| targets:2918   AAAAAAGUCAACGGCGUUAAA   2938 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J043019O07, full insert sequence	NA	coding protein	psRNATarget
CT835080.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |||||||||||||||||||*| targets:1148   CAAAAAGUCAACGGCGUCAUA   1168 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN071I07, full insert sequence	NA	coding protein	psRNATarget
XM_015781390.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |||||||||||||||||||*| targets:1458   CAAAAAGUCAACGGCGUCAUA   1478 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336685 (LOC4336685), transcript variant X2, mRNA	uncharacterized LOC4336685(LOC4336685)	coding protein	psRNATarget
XM_015781389.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |||||||||||||||||||*| targets:1458   CAAAAAGUCAACGGCGUCAUA   1478 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336685 (LOC4336685), transcript variant X1, mRNA	uncharacterized LOC4336685(LOC4336685)	coding protein	psRNATarget
AK240962.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||=||||||||||=|||||| targets:388   UAAGAAGUCAACGGUGUCAAA   408 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065046B10, full insert sequence	NA	coding protein	psRNATarget
AK288703.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |||||||||||||||||||*| targets:3221   CAAAAAGUCAACGGCGUCAUA   3241 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090061G13, full insert sequence	NA	coding protein	psRNATarget
AK100009.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |||||||||||||||||||** targets:815   CAAAAAGUCAACGGCGUCAUC   835 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013138B09, full insert sequence	NA	coding protein	psRNATarget
AK064773.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |||||||||||||||||||** targets:2835   CAAAAAGUCAACGGCGUCAUC   2855 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013000A22, full insert sequence	NA	coding protein	psRNATarget
AK070818.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||=||||||||=|||||| targets:1402   AAAAAGGUCAACGGUGUCAAA   1422 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023068B12, full insert sequence	NA	coding protein	psRNATarget
XM_015761717.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||=||||||||=|||||| targets:1471   AAAAAGGUCAACGGUGUCAAA   1491 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group glucuronokinase 1 (LOC4350084), transcript variant X2, mRNA	glucuronokinase 1(LOC4350084)	coding protein	psRNATarget
XM_015761716.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||=||||||||=|||||| targets:1479   AAAAAGGUCAACGGUGUCAAA   1499 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group glucuronokinase 1 (LOC4350084), transcript variant X1, mRNA	glucuronokinase 1(LOC4350084)	coding protein	psRNATarget
AK069318.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *=||||||=|||||||||||| targets:3347   AGAAAAGUUAACGGCGUCAAA   3367 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023014M14, full insert sequence	NA	coding protein	psRNATarget
AK110581.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||*|||||||| targets:650   UAAAAAGUCAACAGCGUCAAA   670 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-168-E09, full insert sequence	NA	coding protein	psRNATarget
CT834259.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||||||||*| targets:853   UAAAAAGUCAACGGCGUCAUA   873 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA044D20, full insert sequence	NA	coding protein	psRNATarget
XM_015792366.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |=|||||||||||||||||*| targets:860   CGAAAAGUCAACGGCGUCAUA   880 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271886 (LOC9271886), mRNA	uncharacterized LOC9271886(LOC9271886)	coding protein	psRNATarget
AK287754.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |=|||||||||||||||||*| targets:868   CGAAAAGUCAACGGCGUCAUA   888 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065157N06, full insert sequence	NA	coding protein	psRNATarget
AK066336.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||||||||*| targets:1789   UAAAAAGUCAACGGCGUCAUA   1809 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013063O11, full insert sequence	NA	coding protein	psRNATarget
XM_015756907.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||||||||*| targets:1781   UAAAAAGUCAACGGCGUCAUA   1801 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable inactive beta-glucosidase 33 (LOC4347547), mRNA	probable inactive beta-glucosidase 33(LOC4347547)	coding protein	psRNATarget
AK105698.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   |=|||||||||||||||||*| targets:1274   CGAAAAGUCAACGGCGUCAUA   1294 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-201-D03, full insert sequence	NA	coding protein	psRNATarget
XM_015757375.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||||*|||| targets:1465   UAAAAAGUCAACGGCGACAAA   1485 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9272245 (LOC9272245), transcript variant X1, mRNA	uncharacterized LOC9272245(LOC9272245)	coding protein	psRNATarget
AK289103.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||||*||||| targets:395   UAAAAAGUCAACGGCAUCAAA   415 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096G10, full insert sequence	NA	coding protein	psRNATarget
AK288474.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||||||||*| targets:1178   UAAAAAGUCAACGGCGUCAUA   1198 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090038A02, full insert sequence	NA	coding protein	psRNATarget
AK288459.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||||||||||||*|||| targets:291   UAAAAAGUCAACGGCGCCAAA   311 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090035G07, full insert sequence	NA	coding protein	psRNATarget
AK288459.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||*||||||| targets:659   AAAAAAGUCAACGACGUCAAA   679 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090035G07, full insert sequence	NA	coding protein	psRNATarget
XM_015755113.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||||*||||| targets:389   UAAAAAGUCAACGGCAUCAAA   409 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group zinc-finger homeodomain protein 9 (LOC4347054), mRNA	zinc-finger homeodomain protein 9(LOC4347054)	coding protein	psRNATarget
XM_015764779.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||||||||| targets:40   UAAAAAAUCAACGGCGUCAAA   60 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X4, mRNA	putative disease resistance RPP13-like protein 3(LOC4352543)	coding protein	psRNATarget
AK288826.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||*||||||| targets:2187   UAAAAAGUCAACGACGUCAAA   2207 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090073I23, full insert sequence	NA	coding protein	psRNATarget
AK288873.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =||||||||||||*||||||| targets:2367   UAAAAAGUCAACGACGUCAAA   2387 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090078I24, full insert sequence	NA	coding protein	psRNATarget
AK065779.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||||*| targets:988   GAAAAAGUCAACGGCGUCAUA   1008 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013039E23, full insert sequence	NA	coding protein	psRNATarget
AK066136.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||*||||||| targets:3517   GAAAAAGUCAACGACGUCAAA   3537 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013053B22, full insert sequence	NA	coding protein	psRNATarget
AK073219.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||*||||||| targets:3530   GAAAAAGUCAACGACGUCAAA   3550 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033009K14, full insert sequence	NA	coding protein	psRNATarget
AK288428.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||*||||||| targets:918   AAAAAAGUCAACGACGUCAAA   938 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090032O10, full insert sequence	NA	coding protein	psRNATarget
AK288408.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||||||||*|||||||| targets:3000   AAAAAAGUCAACAGCGUCAAA   3020 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030J08, full insert sequence	NA	coding protein	psRNATarget
XM_015764314.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*|||||||||||||| targets:229   AAAAAAAUCAACGGCGUCAAA   249 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group putative L-type lectin-domain containing receptor kinase I.4 (LOC4326097), mRNA	putative L-type lectin-domain containing receptor kinase I.4(LOC4326097)	coding protein	psRNATarget
AK242434.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:526   UAAAAAAUCAACGGUGUCAAA   546 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J080093A09, full insert sequence	NA	coding protein	psRNATarget
CT832797.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||||** targets:780   GAAAAAGUCAACGGCGUCAUC   800 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN008N07, full insert sequence	NA	coding protein	psRNATarget
AK288135.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:568   UAAAAAAUCAACGGUGUCAAA   588 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J080305D01, full insert sequence	NA	coding protein	psRNATarget
AK068336.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||||** targets:1061   GAAAAAGUCAACGGCGUCAUC   1081 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013149H05, full insert sequence	NA	coding protein	psRNATarget
XM_015795035.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||||** targets:1236   GAAAAAGUCAACGGCGUCAUC   1256 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group calcineurin B-like protein 10 (LOC4325933), transcript variant X1, mRNA	calcineurin B-like protein 10(LOC4325933)	coding protein	psRNATarget
XM_015786076.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1635   UAAAAAAUCAACGGUGUCAAA   1655 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X8, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
XM_015786072.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1684   UAAAAAAUCAACGGUGUCAAA   1704 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X4, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
XM_015786077.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1760   UAAAAAAUCAACGGUGUCAAA   1780 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X9, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
XM_015786075.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1767   UAAAAAAUCAACGGUGUCAAA   1787 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X7, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
XM_015786074.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1767   UAAAAAAUCAACGGUGUCAAA   1787 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X6, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
XM_015786073.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1771   UAAAAAAUCAACGGUGUCAAA   1791 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X5, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
XM_015786070.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1777   UAAAAAAUCAACGGUGUCAAA   1797 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X2, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
AK288827.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||||** targets:1413   GAAAAAGUCAACGGCGUCAUC   1433 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090073J08, full insert sequence	NA	coding protein	psRNATarget
AK289053.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||||** targets:785   GAAAAAGUCAACGGCGUCAUC   805 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090092P21, full insert sequence	NA	coding protein	psRNATarget
XM_015786071.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1888   UAAAAAAUCAACGGUGUCAAA   1908 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X3, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
XM_015786068.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1915   UAAAAAAUCAACGGUGUCAAA   1935 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X1, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
XM_015786078.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:1998   UAAAAAAUCAACGGUGUCAAA   2018 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase TURAN (LOC4341323), transcript variant X10, mRNA	UDP-glycosyltransferase TURAN(LOC4341323)	coding protein	psRNATarget
AK243013.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*|||||||=|||||| targets:627   UAAAAAAUCAACGGUGUCAAA   647 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090098F15, full insert sequence	NA	coding protein	psRNATarget
AK288309.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||||** targets:1053   GAAAAAGUCAACGGCGUCAUC   1073 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090020H08, full insert sequence	NA	coding protein	psRNATarget
XM_015762743.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||||||||||||||** targets:58   GAAAAAGUCAACGGCGUCAUC   78 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 1 (LOC107276851), mRNA	putative disease resistance RPP13-like protein 1(LOC107276851)	coding protein	psRNATarget
AK243524.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*|||||||=|||||| targets:3133   AAAAAAAUCAACGGUGUCAAA   3153 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100075M04, full insert sequence	NA	coding protein	psRNATarget
AK288382.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||=|||||||||||||||*| targets:1558   AAAGAAGUCAACGGCGUCAUA   1578 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090026M23, full insert sequence	NA	coding protein	psRNATarget
AK288724.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*||||||||||=||| targets:234   AAAAAAAUCAACGGCGUUAAA   254 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090063A16, full insert sequence	NA	coding protein	psRNATarget
AK289010.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*||||||||||=||| targets:1564   AAAAAAAUCAACGGCGUUAAA   1584 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090089F21, full insert sequence	NA	coding protein	psRNATarget
XM_015790985.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*||||||||||=||| targets:228   AAAAAAAUCAACGGCGUUAAA   248 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278583 (LOC107278583), mRNA	uncharacterized LOC107278583(LOC107278583)	coding protein	psRNATarget
AK289044.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*||||=||||||||| targets:1495   AAAAAAAUCAAUGGCGUCAAA   1515 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090092F18, full insert sequence	NA	coding protein	psRNATarget
AK289044.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*||||||||||||*| targets:613   UAAAAAAUCAACGGCGUCAUA   633 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090092F18, full insert sequence	NA	coding protein	psRNATarget
XM_015763290.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   ||||*||||||||||||||*| targets:1288   CAAACAGUCAACGGCGUCAUA   1308 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein YnbD-like (LOC107279577), transcript variant X3, mRNA	uncharacterized protein YnbD-like(LOC107279577)	coding protein	psRNATarget
XM_015786574.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =*|||||||||||||||||*| targets:1654   UUAAAAGUCAACGGCGUCAUA   1674 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group AAA-ATPase At3g50940 (LOC4341947), mRNA	AAA-ATPase At3g50940(LOC4341947)	coding protein	psRNATarget
CT836034.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*||||||||*||||| targets:49   UAAAAAAUCAACGGCAUCAAA   69 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN059O07, full insert sequence	NA	coding protein	psRNATarget
CT836037.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   =|||||*||||||||*||||| targets:49   UAAAAAAUCAACGGCAUCAAA   69 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN067F22, full insert sequence	NA	coding protein	psRNATarget
XM_015783460.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*|||||*|||||||| targets:901   AAAAAAAUCAACAGCGUCAAA   921 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278662 (LOC107278662), mRNA	uncharacterized LOC107278662(LOC107278662)	coding protein	psRNATarget
XM_015792994.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *||||||*|||||||||||*| targets:2019   AAAAAAGCCAACGGCGUCAUA   2039 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative serine/threonine-protein kinase-like protein CCR3 (LOC4345414), mRNA	putative serine/threonine-protein kinase-like protein CCR3(LOC4345414)	coding protein	psRNATarget
AK288523.1	ncRNA:21   GUUUUUCAGUUGCCGCAGUUU   1   *|||||*||||||*||||||| targets:62   AAAAAAUUCAACGCCGUCAAA   82 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090044C01, full insert sequence	NA	coding protein	psRNATarget