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BaseInfo

ncRNA ID	novel_osa_miR3227
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:2694906-2694976 [+]
Reference genome	IRGSP-1.0
Source	SRR2040386;SRR2097778
Length	24
Mature sequence(if miRNA)	1 - AAGCUAAAUUUAGGAGUUAGAGCU - 24
Stem-loop(if miRNA)	--A                       C  C  AAA    AGCUAAAUUUAGGAGUUAGAGCU UA CA   G    ||||||||||||||||||||||| || ||   A    UCGAUUUAAAUCCUCAAUUUUGA AU GU   G ACC                       U  A  CCU
Stem-loop sequence	AAGCUAAAUUUAGGAGUUAGAGCUCUACCAAAAGAGUCCUGAUAUAGUUUUAACUCCUAAAUUUAGCUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015768148.1	ncRNA:24   UCGAGAUUGAGGAUUUAAAUCGAA   1   |||||||||||||||||||||||* targets:1077   AGCUCUAACUCCUAAAUUUAGCUC   1100 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group chorismate mutase 2 (LOC4328508), mRNA	chorismate mutase 2(LOC4328508)	coding protein	psRNATarget
AK101220.1	ncRNA:24   UCGAGAUUGAGGAUUUAAAUCGAA   1   |||||||||||||||||||||||* targets:1048   AGCUCUAACUCCUAAAUUUAGCUC   1071 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J033031C20, full insert sequence	NA	coding protein	psRNATarget
AY062181.1	ncRNA:24   UCGAGAUUGAGGAUUUAAAUCGAA   1   ||=|=||=||=||||||||||||| targets:99   AGUUUUAGCUUCUAAAUUUAGCUU   122 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) HAP3-like transcriptional-activator (HAP3a) mRNA, complete cds	NA	coding protein	psRNATarget
XM_015775520.1	ncRNA:24   UCGAGAUUGAGGAUUUAAAUCGAA   1   ||||=||=||=||||||||||||* targets:93   AGCUUUAGCUUCUAAAUUUAGCUC   116 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group nuclear transcription factor Y subunit B-3 (LOC4333105), mRNA	nuclear transcription factor Y subunit B-3(LOC4333105)	coding protein	psRNATarget