ncRNA ID | novel_osa_miR3226 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:27189069-27189160 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040386 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGACGAAUAUAACGAGGUAUACU - 24 |
Stem-loop(if miRNA) |
--         A            C   C C   U  A  GGAUGA   GAGACGAAU UAACGAGGUAUA UAA C AUG UU GC      U   ||||||||| |||||||||||| ||| | ||| || ||   CUCUGCUUA AUUGUUCUAUAU AUU G UAC AA CG      U CA         G            A   A A   U  A  AUGUUA |
Stem-loop sequence | GAGACGAAUAUAACGAGGUAUACUAACCCAUGUUUAGCGGAUGAUUAUUGUAGCAAAUCAUAGAUUAAUAUAUCUUGUUAGAUUCGUCUCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015781418.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4335446), mRNA | serine/arginine repetitive matrix protein 1(LOC4335446) | coding protein | psRNATarget | |||||||||
AK107263.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-125-H03, full insert sequence | NA | coding protein | psRNATarget |